Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_7056
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Entry
SHJG_7056 CDS
T02063
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00330
Arginine and proline metabolism
shy00480
Glutathione metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SHJG_7056
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SHJG_7056
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SHJG_7056
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SHJG_7056
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEY92323
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Position
8045763..8046977
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AA seq
404 aa
AA seq
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MSAPEGRGERHARPRRTGSRTTALPRTPDRLLYDLTGIERQYDTLREELPGTRVRFALKA
CPVDDVLRTLAARGAGFDAAGPAEIEQALRAGAHPDHIHYGNTIKSDQDIAKAHRLGVRT
FATDSVEDVTAIAAHAPRARVFCRLATSGDGALWGLNRKFGCAPDDAVRVLRTARAAGLV
PAGLSVHVGSQQMTGEAWQQALDTLAATLTALAGRGIVPDHVNLGGGLPALGYLDRRGNP
LDPPLDKIFAVLREGMERLNVLAAAPLDFVLEPGRHLVADHGVIRAHVVRLTERTQPDGG
RARWLYLSVGKYNGLYEMDQVTHPLVFPGRETEEHVPAIVAGPTCDSDDAYGGGRYPVRV
PRSVRSGDPVRILAAGAYASSYMTQGFNGIRPLPTECTREEGHH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggaggggcgcggggaacggcacgctcgaccgcgacggaccggcagccgc
acgacggcactgcctcgcaccccggaccgcctcctctacgacctcaccggcatagagcgc
caatacgacaccctgcgcgaagaactgcccggaacccgcgtccgcttcgccctcaaggcc
tgcccggtcgacgacgtcctgcgcaccctggccgcccgcggagcgggattcgacgcggcc
ggccccgccgagatcgagcaagccctgcgcgccggtgcgcaccccgaccacatccactac
ggcaacaccatcaagtcggaccaggacatcgccaaggcccaccgcctgggtgtccgcacg
ttcgccaccgacagcgtcgaggacgtcaccgccatcgccgcgcacgcgccccgcgcccgt
gtgttctgccgtctcgccaccagcggggacggcgccctgtggggcctgaaccgcaagttc
gggtgcgcaccggacgacgccgtccgtgtcctgcgcacggcccgcgccgccggcctcgtc
ccggcgggcctgtccgtgcacgtcggctcgcagcagatgaccggcgaggcctggcagcag
gccctggacaccctcgccgcgaccctgacggcgctggccgggcgggggatcgtacccgac
catgtgaacctcggcggcgggctgcccgcgctcggctatctcgaccggcgcggcaacccc
ctcgacccgccgctggacaagatcttcgccgtgctccgcgagggcatggaacgcctgaac
gtgctggccgccgccccgctcgacttcgtgctggagccggggcgccacctggtggccgat
cacggcgtgatccgcgcgcacgtggtccggctgaccgagcggacgcagccggacggcggg
cgggcccgctggctgtacctgagcgtgggcaagtacaacggcctgtacgagatggaccag
gtcacccacccgctggtcttcccggggcgggagacggaggagcacgtccccgcgatcgtc
gccggacccacctgtgacagcgacgacgcctacggcggcggccggtacccggtgcgcgtg
ccccggtccgtccgctccggcgacccggtccggatcctcgccgccggcgcctacgccagc
agctacatgacccaggggttcaacggcatccgcccgctgccgaccgagtgcacccgcgag
gaaggacaccactga
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