Shinella sp. HZN7: shn_18500
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Entry
shn_18500 CDS
T04278
Name
(GenBank) isomerase
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00051
Fructose and mannose metabolism
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
shn_18500
Enzymes [BR:
shz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
shn_18500
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Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
ANH05826
LinkDB
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Position
complement(3828936..3830060)
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AA seq
374 aa
AA seq
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MSRIVSIGISHHRLPLDPPFKASWDGRPRRHFDATIVRVRDEEGREGIGSGDLMKGFEGH
EDLFIGADPRHLERHYEVLSHINFHYGRCWPLDLALWDLAGKVTGEPVWRMLGGRADRVR
LYASSGVLREPAAMAEQAERYIAEGFPAMKVRFSSSAGGRNGWREDVKALEAIRSRVGDR
LELMVDCNQGWRMPWDTTLSWTFKDALVVARELERLGIYWMEEPLHRSDRKGMKALKEAT
SVRIAGGEMTRELYEFRDIIEERAFDVIQPDVALVGGITGCRRLAFQAREAGVAFTPHSW
TNGIGVLANAHLTAGAGDAPFLEYPYDGPEWSEARRDYPLQAPLRHEDGWLVLGETPGLG
VVLDEDRLRATRLG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggatcgtttccatcggtatcagccatcaccggctgccgctcgatccgccgttc
aaggcgagctgggacgggcgcccgcgccgacatttcgacgcgacgatcgtgcgcgtgcgc
gacgaggaaggtcgcgaaggcatcggctccggcgacctgatgaaggggttcgagggccat
gaggacctgttcatcggcgcggacccgcgccatctcgaacggcattacgaagtgctctcg
cacatcaatttccactatggccgctgctggccgctcgatctggcgctctgggaccttgcg
ggcaaggtgacgggcgagccggtctggcgcatgctcggcggccgtgccgaccgggtgcgg
ctctatgcgtcctccggcgtgctgagagaacctgccgccatggctgagcaggccgagcgc
tatatcgcggaaggctttccggcgatgaaggtgcggttctcttcctccgccggcgggcgc
aacggctggcgcgaggacgtgaaggcgctggaggcgatccgctcccgtgtcggcgaccgg
ctggagctgatggtcgactgcaaccagggttggcgcatgccctgggacacgacgctctcc
tggaccttcaaggatgcgctcgtcgtcgcgcgcgagctggaacggctcggcatctactgg
atggaggagccgttgcaccgctccgaccgcaagggcatgaaggcgttgaaagaggcgacg
agcgtgcgcatcgcgggcggggagatgacgcgcgagctttacgagttccgcgacatcatc
gaggagcgcgccttcgacgtgatccagccggacgtggcgctggtcggcggcatcacggga
tgccggcggctcgccttccaggcgcgcgaggcgggcgtcgccttcactccgcattcctgg
acgaacggcatcggcgtgctcgccaatgcgcatctgacggcgggggcgggtgatgcgccc
ttcctcgaatatccctatgacgggccggaatggagcgaggcgcgccgcgattatccgctg
caggcgccgctacggcacgaggacggctggctggtgctgggcgaaacgcccggcctcggc
gtggtcctcgacgaggaccggctccgggcgacgcggctcggctga
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