Shinella sp. HZN7: shn_23955
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Entry
shn_23955 CDS
T04278
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10112
multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_23955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_23955
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Maltose/maltodextrin transporter
shn_23955
Maltose transporter
shn_23955
Arabinogalactan oligomer/maltooligosaccharide transport system
shn_23955
Raffinose/stachyose/melibiose transporter
shn_23955
Alpha-glucoside transporter
shn_23955
Glucose/mannose transporter
shn_23955
Trehalose/maltose transporter
shn_23955
Cellobiose transporter
shn_23955
N,N'-Diacetylchitobiose transporter
shn_23955
L-Arabinose/D-xylose transporter
shn_23955
Fructooligosaccharide transporter
shn_23955
Putative sorbitol/mannitol transporter
shn_23955
Arabinooligosaccharide transporter
shn_23955
Polygalacturonan/rhamnogalacturonan transporter
shn_23955
Pectin-derived oligosaccharide transporter
shn_23955
Putative multiple sugar transporter
shn_23955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
OB_MalK
TOBE_2
SMC_N
CysA_C_terminal
RsgA_GTPase
nSTAND1
AAA_25
AAA_29
nSTAND3
AAA_22
AAA_16
AAA_19
NACHT
AAA_5
Mg_chelatase
AAA_28
AAA_23
MMR_HSR1
Rad17
URGCP_GTPase
Motif
Other DBs
NCBI-ProteinID:
ANH07185
LinkDB
All DBs
Position
pShin-01:344233..345297
Genome browser
AA seq
354 aa
AA seq
DB search
MSTLTIDAIRKSYGAVETLKGIDIALESGEFLVLLGASGCGKSTLLNIIAGLAEPTSGDI
RIDDRSIVGVHPKDRDIAMVFQSYALYPNLTVHRNIGFGLEMRKVDRAERDRAVRETAKL
LQIENLLERKPGQLSGGQRQRVAIGRALVRNPKIFLFDEPLSNLDAKLRMEMRTELKRLH
QMTRTTVVYVTHDQIEAMTLATRIAVMRGGRIEQLDTPENIYNRPATLYVATFVGAPPMN
LLAATAGEGGLRIDGTDIIVPVPDLDGIAPGRRLVLGIRPEAIERSGAGVPLTARCEVAE
LTGPELVVTAAMGSQRLVAALPATARIAAGDEIALAVAPAAFHVFDAETEQRLN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgaccattgacgccatccgcaagagctacggcgccgtcgagacgctgaag
ggcatcgacatcgcgctcgaaagcggggaattcctcgtgctgctcggcgcctccggctgc
ggcaagtccacgctgctcaacatcatcgccggccttgccgagccgacgagcggcgacatc
cgcatcgacgaccgctccattgtcggcgtgcatccaaaggacagggacatcgccatggtg
ttccagtcctacgcgctctatcccaatctcaccgtgcaccggaacatcggtttcggcctc
gaaatgcgcaaggtggacagggcggaacgcgaccgggccgtgcgcgagacggcgaagctg
ctgcagatcgaaaacctgctggagcgcaagcccggccagctttccggcggccagcgccag
cgcgtggcgatcggccgggcgctggtgcgcaacccgaagatcttcctgttcgacgagccg
ctgtccaatctcgatgcgaagctgcgcatggaaatgcgcaccgagctgaagcgcctgcac
cagatgacgaggacgaccgtcgtctatgtcacgcatgaccagatcgaggcgatgacgctc
gccacccgcatcgccgtcatgcgtggcggccggatcgaacagctcgacacgccggagaac
atctacaaccggccggcgacgctctacgtcgccaccttcgtcggcgcgccgccgatgaac
cttctggccgcgacggcgggcgagggcggcttgcggatcgacggcactgacatcatcgtg
cccgtgcctgatctggacggtatcgcgccgggccgccggctcgtcctcggcatccggccg
gaggcgatcgaacggtcgggtgcgggcgtgccgctcacggcgcgctgcgaggtcgcggag
ctgaccgggccggagctggtcgtcacggcggcgatgggcagccaacgcctcgtcgccgcc
ctgccggcgaccgcccgcatcgcggctggcgacgagatcgcccttgccgtcgcgcccgcc
gccttccacgtcttcgacgcggagacggagcagcgcctgaactga
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