Streptococcus infantarius subsp. infantarius: Sinf_0094
Help
Entry
Sinf_0094 CDS
T01765
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sinf_0094 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sif03021
]
Sinf_0094 (rpoB)
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_0094 (rpoB)
Enzymes [BR:
sif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sinf_0094 (rpoB)
Transcription machinery [BR:
sif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sinf_0094 (rpoB)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sinf_0094 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
NusG_add
Motif
Other DBs
NCBI-ProteinID:
AEZ61472
LinkDB
All DBs
Position
95120..98689
Genome browser
AA seq
1189 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDNGLREVFEDVLPITNFTD
TMELEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIMDIFGDSELVRNTIEKDIHKNPADSRTDEALKE
IYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNIKTRLLNQTIAENLV
DAETGEILVEAGTVMTRDVIDSIADQLDGDLNKFVYTPNDYAVVTEPVVLQKFKVISPVD
PDRVVTIVGNAYPDDKARALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSTYGH
LNKYGFIQTPYRKVDRATGVVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEDIVMGRH
QGNNQEFPSNIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPHAP
YVGTGMEYQAAHDSGAAVIAKHDGRVVFSDAEKVEVRREDGSLDVYHITKFRRSNSGTAY
NQHTLVKVGDIVEKGDFIADGPSMEKGEMALGQNPIVAYMTWDGYNYEDAIILSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRVVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGATSEDLWDTVNEAGMASDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDVMHVDDLEKARQKQETEEAEKAEVSAEEK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcagtacgggaaacaccgtacacgtcgtagcttttcaagaatc
aaggaagttcttgatttacctaacttgattgaaattcaaacggattcttttaaagacttc
ttggataacggattaagagaagtttttgaagatgtacttccaattacaaactttacggat
actatggaacttgaatttgttggttatgaattgaaagagcctaagtatacgcttgaagaa
gctcgtatccacgatgcatcttactcagcacctatctttgtaaccttccgtttgattaac
aaagaaacaggagaaatcaaaactcaagaggttttcttcggtgatttcccaattatgact
gaaatgggtacattcatcatcaatggtggtgaacgtattatcgtttctcagctggttcgt
tctcctggtgtttatttcaacgataaagttgataaaaacggtaaagttggttacggttca
actgtaatccctaaccgtggagcatggcttgaattagaaacagattcaaaagacattgct
tacacacgtatcgaccgtacacgtaaaattccatttacaacacttgtacgtgctcttggt
ttctcaggtgatgatgaaatcatggatatctttggtgacagcgaacttgttcgtaacact
atcgaaaaagatattcacaaaaacccagcagattcacgtactgacgaagcacttaaagaa
atttacgaacgtcttcgtccaggtgaaccaaaaacagctgatagctcacgtagcttgctt
gtagctcgtttctttgacccacgtcgttatgacttggcagctgttggtcgttacaaaatc
aacaaaaaacttaacatcaagactcgtctcttgaaccaaacaattgctgaaaacttggtt
gatgctgaaactggtgaaatccttgttgaagctggtacagtaatgacacgtgatgttatc
gattcaattgctgatcaattggatggtgaccttaacaaatttgtttacacaccaaatgat
tacgctgttgtcactgaacctgttgttcttcaaaaattcaaagttatatcaccagttgat
ccagatcgcgttgttacaatcgttggtaatgcatatcctgatgacaaagcacgtgcgctt
acaccagctgatatcttggctgaaatgtcatacttccttaaccttgctgaaggtctaggt
aaagttgatgatatcgaccaccttggtaatcgtcgtattcgtgccgttggtgaattgctt
gctaaccaattccgtattggtcttgctcgtatggaacgtaacgttcgcgaacgtatgtca
gtacaagataatgaagtgttgacaccacaacaaatcatcaacatccgtcctgtaactgca
gccgttaaagaattctttggttcttctcaattgtcacagttcatggaccaacacaaccca
ctttctgagttgtctcacaaacgtcgtttgtcagccttaggacctggtggtttgactcgt
gaccgtgctggttatgaagttcgtgacgtgcactacactcactatggtcgtatgtgtccg
attgaaactcctgaaggacctaacatcggtttgatcaataacttgtctacatacggacac
cttaacaaatatggtttcatccaaacaccatatcgtaaagttgaccgcgctacaggtgtg
gttacaaacgaaatcgtttggttgactgccgatgaagaagatgaatacacagtagcacag
gctaactcaaaacttaacgaagatggaacatttgctgaagacatcgttatgggtcgtcac
caaggtaataaccaagagttcccatcaaacatcgttgacttcgttgacgtttcacctaaa
caagtagttgccgttgcgacagcatgtattcctttccttgaaaacgatgactctaaccgt
gcccttatgggtgccaacatgcaacgtcaagcggtgccattgattgatccacacgcacca
tatgttggtactggtatggaatatcaagcagcccacgattcaggtgctgccgtcatcgct
aaacacgatggacgagttgttttctctgacgctgaaaaagttgaagttcgtcgtgaagat
ggttcacttgatgtttaccacatcactaaattccgtcgttctaactcaggtacagcttat
aaccaacacacacttgttaaagttggcgatatcgttgaaaaaggtgacttcatcgctgat
ggtccttcaatggaaaaaggtgaaatggcccttggtcaaaacccaatcgtcgcttacatg
acttgggatggttataactatgaagatgccatcatcttgagtgaacgtcttgttaaagaa
gatgtttacacatcagttcacttggaagaatttgaatcagaaacacgcgatactaagtta
ggccctgaagaaatcactcgcgaaattccaaacgttggtgaagaagctcttaaagacctt
gacgaaatgggtatcatccgtattggtgctgaagttaaggaaggtgacatccttgtaggt
aaagtaacacctaaaggtgaaaaagacctttctgctgaagaacgtcttcttcacgcaatc
ttcggtgataaatctcgtgaagttcgtgatacatcacttcgtgtaccacacggtggagat
ggtgtcgttcgtgacgttaaaatctttacacgtgcaaacggtgatgaattgcaatcaggt
gttaacatgctcgttcgtgtttacatcgcacaaaaacgtaaaatcaaagtcggagataaa
atggccggtcgtcacggtaacaaaggggttgtttctcgtgttgttccagttgaagacatg
ccttaccttccagacggaactccagtcgatatcatgttgaacccacttggggtgccatct
cgtatgaacatcggacaagttatggaacttcaccttggtatggctgctcgtaaccttggt
atccacattgcaacaccggtcttcgacggggcaacttcagaagatctttgggatactgtt
aacgaagctggtatggccagcgacgctaagacagttctttacgatggacgtactggtgaa
ccatttgataaccgtgtgtcagttggtgtcatgtacatgatcaaacttcaccacatggtt
gatgataaacttcacgcacgttcagttggtccttactcacttgttacacaacaacctctt
ggtggtaaagcacaatttggtggacaacgtttcggtgaaatggaagtttgggctttggaa
gcttacggtgcatcaaacgtccttcaagaaatcttgacttacaagtcagatgatgtgact
ggtcgtcttaaagcttatgaagccatcactaaaggtaaaccaattccaaaaccaggtgtg
ccagaatcattccgagtacttgttaaagaattacaatcacttggtcttgacatgcgcgtg
cttgacgaagatgacaacgaagttgaacttcgtgaccttgatgaaggtgaagatgacgac
gtaatgcacgttgatgatcttgaaaaagctcgtcaaaaacaagaaacagaagaagctgaa
aaagctgaagtttctgcagaggaaaaataa
DBGET
integrated database retrieval system
