Streptococcus iniae SF1: K710_0147
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Entry
K710_0147 CDS
T02686
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sik
Streptococcus iniae SF1
Pathway
sik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K710_0147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sik03021
]
K710_0147
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_0147
Enzymes [BR:
sik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K710_0147
Transcription machinery [BR:
sik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K710_0147
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K710_0147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
NusG_add
Motif
Other DBs
NCBI-ProteinID:
AGM97952
LinkDB
All DBs
Position
114867..118430
Genome browser
AA seq
1187 aa
AA seq
DB search
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQEFLDAGLKEVFEDVLPISNFTD
TMELEFVGYEFKEPKYTLEEARVHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDAKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESELVRNTIEKDIHKNPNDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQVIAENLV
DGETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPLD
PDKVVTIVGNCQPDDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRESGVVTSEIVWLTADEEDEFTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFPASQVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
FVGTGMEYQAAHDSGAAVIAQHDGKVVFSDAEKVEVRREDGSLDVYHVTKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGAEEITREVPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASAEDLWDTVAEAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDVMHVDDLEKAREKQVQEAEEALQTKED
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcgatacggaaaacaccgtacacgtcgtagcttttcaagaatc
aaagaagttcttgatttaccaaacttgattgaaattcaaactgactcattccaagagttt
ctagatgcaggtttgaaggaagtttttgaagacgtacttccaatttcaaactttacagat
actatggaacttgagtttgttggatatgaattcaaagagccaaaatacactttagaggaa
gctcgtgttcacgatgcctcttattctgcacctatttttgtaacctttagattggtaaac
aaggaaactggtgagattaaaacacaagaagtattctttggtgatttcccaattatgact
gaaatgggaacctttatcatcaatggtggtgaacgtattatcgtttcacagttggtgcgt
tctccaggtgtttatttcaatgataaagtggataaaaacggaaaagttggctatggatca
actgttatccctaaccgtggtgcatggttagagttagaaacagatgcaaaagacattgct
tacactcgtattgaccgtactcgtaaaattccgtttacaacacttgtgcgtgcacttgga
ttttcaggtgatgacgaaatcgttgatatctttggtgagagtgaattagttcgtaacact
attgagaaagatatccataaaaatccaaatgattcacgtacagacgaagcccttaaagaa
atttatgaacgcttaagaccaggtgaacctaaaacagctgatagctcacgtagcttattg
attgcgcgcttcttcgacgcacgtcgttatgacttagcagcagttggtcgctataaagtg
aacaaaaaacttaacattaaaacacgtttgttgaatcaagtgatcgcagaaaatcttgtc
gacggtgaaacaggtgaaattcttgttgaagctggaacagaaatgacgcgttcagtcatt
gaatctattgaagagcatcttgatggtgatttgaacaaatttgtatacacaccaaatgac
tatgccgttgtgacagaacctgttgtcctacaaaaattcaaagtggtttcgccacttgat
ccagataaagttgttaccattgttggtaactgccaacctgatgacaaagttcgtgcactt
acaccagctgatatccttgcagaaatgtcatatttcttgaaccttgcagagggtcttgga
aaagttgatgacattgaccacttgggtaaccgtcgtattcgtgcagttggtgaattgctt
gctaaccaattccgtattggtcttgctcgtatggaacgtaatgttcgcgaacgcatgtct
gttcaagacaatgatgttttaacaccacaacaaatcatcaatattcgtcctgtaacggca
gctgttaaagaattctttggttcttctcaattgtcacagttcatggaccaacataatcct
ctttctgaattatcacacaaacgtcgtctttcagccttaggacctggtggtttgacgcgt
gaccgtgccggctatgaagttcgtgacgtgcattacactcactatggtcgtatgtgtccg
attgagacaccagagggaccaaatatcggtctgatcaataacttatcttcatttggacat
ttgaataaatatggctttattcaaacaccttaccgcaaagttgaccgtgaaagcggcgtt
gttacaagtgaaattgtttggttgactgctgatgaagaagatgaatttacagttgcacag
gctaattctaaattaaatgaagatggcacttttgctgaagaaatcgttatgggacgtcat
caaggtaataaccaagagttcccagctagtcaagttgactttgtagacgtttctcctaag
caggtagttgccgttgcgacagcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgattgatcctaaagcacca
tttgttggtactggtatggaatatcaagcagcccacgattctggtgctgcagtgattgca
cagcacgatggtaaagttgttttctcagatgctgaaaaagttgaagttcgtcgtgaagat
ggttcacttgatgtttaccatgtaacaaaattccgtcgttcaaactcagggacagcttat
aaccaacgcacacttgttaaagtcggcgacattgttgaaaaaggtgacttcattgctgat
ggcccatctatggaaaacggtgaaatggcccttggtcaaaatccagtcgttgcttatatg
acatgggaaggttataacttcgaggatgctgttatcatgagtgagcgccttgtgaaagaa
gatgtttacacatctgttcacttggaggagttcgaatcagaaacacgcgatacaaaactt
ggtgcagaagaaattacacgtgaagtaccaaacgttggtgaagaagcccttaaagacctt
gacgagatgggaattatccgtatcggtgctgaggttaaagaaggtgatatccttgttggt
aaagtcacacctaaaggtgaaaaagacttatcagcagaagaacgtcttttacatgctatc
tttggcgataaatcacgtgaagttcgtgacacttctcttcgtgtgcctcacggtggcgat
ggtattgtacgtgatgtgaaaatctttacgcgtgctaatggtgatgaattgcaatcaggc
gtaaatatgcttgttcgtgtttacatcgctcaaaaacgtaaaattaaagttggagataaa
atggccggtcgtcacggaaacaagggggttgtttcacgtattgttccagttgaagacatg
ccttacttgccagatggtacgccagttgatatcatgttgaaccctcttggggtgccttca
cgtatgaatatcggacaagttatggaactccaccttggtatggcggctcgtaacctcgga
attcacattgcaacgccagtctttgacggggcaagtgcagaagacctttgggatacggtt
gctgaagctggtatggattcagatgcgaagactgtcctttacgatggacgtactggtgag
ccatttgacaaccgtgtctcagttggtgtcatgtacatgattaaacttcaccacatggtt
gatgataaacttcacgcccgttctgtaggaccttactcacttgttacacaacaacctctt
ggtggtaaagcacaatttggtggacaacgttttggtgagatggaagtttgggcccttgaa
gcttatggtgcctcaaatgttcttcaagaaatcctaacatacaaatcagatgatgttact
ggacgtttgaaagcatatgaagcaatcactaaaggtaaaccaattccaaaaccaggtgtt
ccagaatcattccgcgttcttgttaaagaattacaatcacttggtcttgacatgcgtgtt
cttgatgaagatgacaatgaagttgaacttcgtgaccttgatgaaggtgaagatgatgac
gtgatgcacgttgatgatcttgaaaaagcccgtgaaaaacaagttcaagaagcagaagaa
gctttacaaacaaaagaagactaa
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integrated database retrieval system
