Streptococcus iniae SF1: K710_0820
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Entry
K710_0820 CDS
T02686
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
sik
Streptococcus iniae SF1
Pathway
sik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K710_0820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_0820
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K710_0820
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AGM98597
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Position
801646..802893
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AA seq
415 aa
AA seq
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MNELIKHKLDLLPDSPGCYLHKDKNGTIIYVGKAKNLKNRVRSYFRGSHDTKTEILVSEI
EDFEYIVTGSNTEALLLEINLIQENMPKYNIKLKDDKSYPFIKITNELFPRLLITRQIKK
NDGLYFGPYPDSYTANEVKKLLDRIFPFKKCKNPLNKVCFYYHIGQCHAHSICQTDKAYW
DSLVEDVKQFLNGKDDKIVNNLKEKMLAASKDMAFERAAEYRDLISGIATMRTKQRVMSK
DLKDRDIFGYYVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNDAEDDFLTYMGQFYQDKRH
FLPKEIFIPSDIDLELAQAIVPSKIIKPQRGEKKQLVSLATKNARVSLQQKFDLLEKDLK
KTQGAIENLGQLLGIERPSRIEAFDNSNIQGTSPVAAMVVFKDGKPVKKTTVSLR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgatcaaacacaaattagacttacttcctgatagtccaggctgttattta
cataaagataaaaatggcactattatctatgttggtaaagctaaaaatttaaaaaaccgt
gtccgttcttattttaggggaagtcacgataccaaaacagaaatattagtctcagaaatt
gaggattttgaatacattgtaacaggctcaaatacagaagccttgctcttggaaattaat
ctgattcaagagaacatgccgaaatacaatatcaaattaaaagatgacaaatcttatcct
tttattaaaatcacaaatgagcttttcccgagactcttaattacgagacagattaaaaag
aatgatggtttgtactttggtccctatccagattcctacacagcaaatgaggttaaaaaa
ctcttagaccgtatttttccttttaagaaatgtaaaaacccattgaacaaagtctgtttt
tattatcatatcggccaatgccatgcccatagtatttgtcaaactgacaaagcttactgg
gatagtttggtcgaagatgttaaacagttcttaaatggtaaagatgataagattgttaat
aacttaaaagaaaaaatgctggccgcctcaaaggatatggcatttgaacgcgcagcagaa
tatcgtgatttgatttctggcattgcgacgatgagaaccaagcaacgtgtcatgagtaaa
gacttaaaagatagggatatttttggttattatgtagacaaaggctggatgtgtgttcag
gtattctttgttcgacaaggaaaactgattcaacgtgatgttaatatgtttccgtattat
aatgatgctgaggatgattttttaacctatatggggcaattttaccaagataaaaggcat
ttccttccaaaagaaatctttatcccaagtgatattgatttggaattggctcaagctatt
gtacctagtaaaatcattaagcctcaaagaggagaaaagaagcagttggtgtcactagct
acaaaaaatgcacgtgttagccttcagcaaaaatttgaccttttagaaaaagaccttaaa
aagacccaaggtgctattgagaatttagggcagctgcttggcatagaaaggccaagtcga
attgaagcgtttgataattctaatatccaaggaaccagtccagttgctgcaatggttgtt
tttaaagatggaaaaccagtaaaaaagactaccgtaagtttaagataa
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