Ruegeria pomeroyi: SPO1842
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Entry
SPO1842 CDS
T00215
Name
(GenBank) transcriptional regulator, GntR family
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO1842
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SPO1842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_IclR
HTH_24
HTH_36
TrmB
RepL
HTH_11
RP-C
MarR_2
Rrf2
HTH_DeoR
Sigma70_r4_2
HTH_41
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
AAV95121
UniProt:
Q5LSC6
LinkDB
All DBs
Position
1960440..1961216
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AA seq
258 aa
AA seq
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MSSDAIETIETYLRPGAWVEDAAGPLYVRLRKRIEQGIDSGLLAKSAPLPAEREIASLTG
LSRVTVRRAMQELVDRGIIVQRQGSGSFVADAAPRVEQSLSHLTSFTEDMERRGLNVTSE
WLTRGVFIPSPEEVMALALSSGEQVARVARLRRAEGRPMAIERASLPTDILPDPELVSSS
LYAVLERDGNRPVRALQRISAVNLGAEDAALLGVEPGTAGLRIIRTSYLPNRRVIEYTRS
LYRADAYDFVAELRLGNS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacgccatcgagaccatcgagacctatctgcgccccggcgcctgggtcgag
gacgcggcgggcccgctttacgtgcggctgcgcaagcggatcgaacagggtatcgacagc
ggcctgttggccaaaagcgcgcctttgcccgccgagcgcgaaatcgccagcctgaccggc
ctgtcgcgtgtcaccgtgcgccgggcaatgcaggaactggtcgatcgcggcatcatcgtt
cagcgccagggatcgggcagtttcgtcgccgatgccgccccccgggtcgaacagtcgctg
tcgcatctgacctcgttcaccgaggatatggagcggcgcggcctcaatgtcaccagcgaa
tggctgacgcgcggcgtgttcatcccctcgcctgaagaggtgatggcgctggcgctcagc
tcgggcgagcaggtggcgcgggtcgcgcgcctgcgccgcgccgaggggcgacccatggcg
atcgaacgcgcctcgctgcccaccgatatcctgcctgacccggaactggtgtcctcgtcg
ctttatgcagtgctagaacgcgacggcaaccgcccggtgcgcgcgctgcagcggatctcg
gcggtcaatctgggtgccgaggatgcggccttgctaggggtcgaaccgggcaccgccggg
ctgcgcatcatccgcacctcgtacctgccgaaccggcgggtcatcgaatacacccgctct
ctttaccgcgcggacgcctacgatttcgtggccgaactgcgccttggcaacagctag
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