Sesamum indicum (sesame): 105157665
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Entry
105157665 CDS
T04135
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sind03016
]
105157665
Enzymes [BR:
sind01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
105157665
Transfer RNA biogenesis [BR:
sind03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
105157665
Prokaryotic type
105157665
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
105157665
NCBI-ProteinID:
XP_011072400
UniProt:
A0A6I9SQL4
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Position
LG3:complement(8203389..8209268)
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AA seq
992 aa
AA seq
DB search
MPQIANLRLLLSSANYHHRHPFSAAPIFFRKNRTFSSSFAFSLKPPLPFAAFSAYSKKPH
STGNNNKNSRSFNRNTSTSRETSKKKDKSSDKGGFLAMEERDAGTKGATEVFGFNRKRAE
GRDESDRPKKNLQLKVRKLNPANTISYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEG
LQRFCSEHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGMGDEGMSVNVWGPSDFKYLV
DAMKSFIPNAAMVHTRSFGPMLGPNGSSSNMSRKFDDPFVLIDDEVVKISAVLLRPRCIE
VSDSMKERSYELSSPEFGVNSTKPGDVSVIYICELPEIKGKFDPKKAAALGLRPGPKYRE
LQLGNSVKSDRENIMVHPSDVLGPSVPGPIVLLVDCPTSSHLQDLLSLQCLTPYYVDTAY
DVAEGSKIVNCVIHLSPSFVTKTDDYQTWMSKFGAAQHIMAGHEMKNVEVPILKASARIA
ARLNYLCPQFFPSPGFWSLQNLNVSSEAIAFDKSLLPTTRESIPAENLLKFHLRPYANLG
LDKSGIPNLSSPSEIIEELLSEIPEIGDASQQVTQFWLDNRDTCAEKASMDAETVITEEP
WLHECTLPSCLENITREEMEIVLLGTGSSQPSKYRNVSSIFINLFSKGSILLDCGEGTLG
QLKRRFGVQGADEAVRGLKCIWISHIHADHHTGLVRILALRRDLLKGVLHEPIIIVGPRQ
LKRFLDAYQRLEDLDMQFLDCWHTTEASLEALGSKEDNAVQESPAHSQGSKNGSTVGLVG
ENVDSTLFARGSRMQSFWKRPGSPTQIAAAIPILKSLKKVLAEAGLEALISFPVVHCPQA
FGVVLQASNRINKVGKTIPGWKIVYSGDTRPCPELVKASRGATVLIHEATFEDSMVDEAI
ARNHSTTKEAVEVGDSAGAYRIILTHFSQRYPKIPVFDETHMHKTCIAFDMMSVNLADIH
VLPKVLPYLKLLFRDEMVVDESEDVNLDTALA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgccccagattgcaaaccttcgcctccttctctcctccgccaactaccatcatcgccat
cccttctccgccgccccaattttcttccgtaaaaatcgcactttttcctcttcctttgct
ttctccctcaaacccccactcccatttgccgctttttcggcttactccaagaaaccgcat
agcacgggtaacaataacaagaattcccgttcttttaatcggaacacaagtacttctaga
gagacttcgaagaagaaggataaaagtagtgataaaggcggtttcttggcgatggaagaa
agggacgcaggtacaaaaggtgcaactgaggtttttggatttaatagaaagagggctgag
ggtagagatgagagtgataggcccaaaaagaatttgcagcttaaagttcgaaagctgaat
cctgctaatacaatttcctatgttcagattcttgggactggtatggacactcaagataca
tcaccatcagtgctgctgttttttgacaagcaaagatttatatttaatgctggagaagga
ctgcaacgcttttgcagtgagcacaaaatcaaattatcgaagattgatcacatattcctc
tcacgtgtctgctcagaaactgctggtggacttccaggtctcttattgactctggctggc
atgggggatgaaggaatgtctgtcaatgtatggggtccctcggattttaaatatttagtt
gatgctatgaaatctttcatccctaatgctgccatggttcatacgcgtagttttggtcca
atgcttggtccaaatggatcttccagtaacatgtcaaggaagtttgatgatccttttgtt
cttattgatgatgaagtggtcaaaatttcagctgtactcttaagaccaagatgtatagaa
gtttctgactcgatgaaggaaagatcttatgagttgagttctccagaatttggtgtgaac
tcgactaagcctggtgatgtttctgttatttatatatgtgaattgcctgaaattaaggga
aaatttgaccccaaaaaagctgctgctcttggattaagacctggcccaaagtatcgtgaa
ttgcaacttggaaattctgttaagtcagatcgtgaaaatatcatggtacacccaagtgat
gtgcttggtccttctgttcctggtcctattgtactgctggtcgactgcccaacgtcatca
catttgcaggatttattgtctctacaatgtcttaccccttattatgtagatactgcttat
gacgtagcagaaggttccaaaattgtgaattgtgtgattcacctaagtccctcattcgtc
acaaagacagatgattaccaaacgtggatgtcaaaatttggagccgctcaacatattatg
gcagggcatgaaatgaaaaatgtcgaggttccaattttaaaagcaagtgctagaattgca
gcacgtcttaactatctgtgtcctcaattttttccatctcctggtttttggtctctgcag
aacctgaacgtgtcatctgaagcaatagcatttgataagagtctcttgccaacaaccaga
gaatcaattccagcagagaatcttctcaagttccatctgcgcccgtatgcaaatcttgga
cttgacaaatcgggtataccaaatttatcatctccttcagagatcattgaagagctacta
tctgagattcctgagattggagatgcttctcaacaagtaacccagttctggttggataac
cgagatacttgtgcagagaaagcatcgatggatgctgaaacagttataactgaggagcca
tggttgcatgaatgtacacttcctagctgtcttgaaaatataactagagaagaaatggag
attgttcttctgggcactggttcctctcagccctcgaagtatcgaaatgttagttccatt
tttatcaatttattttcaaagggaagtatacttttagattgtggcgaaggaactctggga
cagctaaaaagaagatttggtgtccagggtgctgatgaagctgtaagaggtttaaaatgt
atctggatttcacatatacatgctgatcatcatacgggcctggtcagaatcctggctctg
cgacgggatttattgaaaggagtactacatgaacctatcatcattgtcggccctaggcag
ctcaagaggtttctcgatgcctaccagagacttgaggatctagatatgcagtttctagat
tgttggcatacaacagaagcttcgcttgaggctttaggatcaaaggaagacaacgccgtg
caagaaagtcctgcgcactctcagggcagtaagaatggaagcacagttgggttagtcggt
gaaaatgttgattctactttgtttgctagaggaagccgtatgcagagtttctggaaaagg
ccgggaagtcctactcagattgctgctgccattcctatcctcaagtccttgaagaaggtt
cttgcagaagctggattagaagcgttgataagttttcctgtggtgcattgcccacaagca
tttggtgttgtattgcaagcctcaaataggatcaacaaagttggaaaaaccatacctggg
tggaaaatcgtgtactcaggtgacaccaggccttgcccggaacttgtcaaggcttctcgt
ggtgcaactgttcttattcacgaggcgacttttgaagatagcatggtggatgaggccatt
gcacgaaaccacagcacaaccaaggaagctgtggaagtaggagattctgctggtgcatat
cgcatcatccttactcatttcagccaacgataccccaagattccggtgtttgacgaaact
cacatgcataaaacttgcattgcttttgatatgatgagtgtaaacttggcagatatacat
gttcttccaaaggtgctgccgtatttaaaactcttgtttagagatgaaatggttgttgat
gaatccgaggatgtgaatttggatactgcacttgcctaa
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