KEGG   Sesamum indicum (sesame): 105160368
Entry
105160368         CDS       T04135                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105160368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105160368
Spliceosome [BR:sind03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105160368
 Complex B
    105160368
 Complex C
   U2 SnRNP specific factors
    105160368
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N LLPH
Other DBs
NCBI-GeneID: 105160368
NCBI-ProteinID: XP_011076004
UniProt: A0A6I9SYV0
LinkDB
Position
LG4:complement(9174391..9179962)
AA seq 512 aa
MSSTLLEVTRASHEEVERLERLIVKDLQSDPPTNKDRLYQSHRVRNMIEQITSTTHKLIE
IYEDKDNARKDEIAALGGQSSTSANVNVFSAFYDRLKEIREYHRRHPAARYVVDTNDEYE
QLLKEEPVIEFTGEEAFGRYLDLHELYNDYINSKFGKQIEYSAYLDVFSDPGRISRKLKL
TRQYREYMQKLLEYLVYYFERTEPLQDLDRIFSKVIAEFEEQWSNGLVEGWKNENHEDGN
VQQQDAIVDLDYYSTVEELMELGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKL
DRKHFAKGSRGPEQNGGTITLQSSEDAKEIALMEAKVEKLCDLLHETIVRTKENIEKKHA
LTYDEIVQEREEDEVQPESESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCE
ICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKQLWEKIQEKQGLN
KWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctgctggaggtgactcgtgcgtcgcacgaggaagtggagcggcttgag
cgcctcatcgtgaaggatctccagtccgacccgccgaccaacaaagaccggctctaccag
agtcaccgcgttcgcaatatgatcgaacaaatcacctccaccactcacaaactgattgaa
atttacgaagataaagacaatgctaggaaggatgagattgcggcgctcggtggacagagt
tcgacatcagcgaatgttaacgtttttagtgcattttatgatagattaaaagagattcgt
gagtaccatagacggcatccagctgcacgatatgttgttgacacgaatgatgagtatgaa
cagcttctcaaagaggagccagtcattgagtttactggggaggaagcatttggacggtac
cttgatttacatgaactatataatgattacatcaactccaagtttgggaagcaaattgag
tactctgcttatcttgatgtattttcggatccagggaggatatcccgcaaattgaagttg
actaggcaatatcgggaatatatgcaaaaacttctggaatatcttgtatactattttgag
cgcacagaacctttgcaagatcttgacagaatattttcgaaggtaattgctgaatttgaa
gagcaatggagcaatgggctcgtagaaggatggaaaaatgagaaccatgaagatgggaat
gtccaacaacaggatgcaattgttgatcttgattattatagtactgttgaggagctaatg
gaactaggacctgagaagttaaaggaggcgttagctgcacttggtctaaaaacaggaggt
actgtacaacagcgtgccgagaggctttttcttacaaagcacacgcctcttgaaaaattg
gatagaaaacattttgctaaaggctcacgtggacctgaacaaaatggtggtacaatcacc
ctacaatccagtgaagatgcaaaagagattgccttgatggaagcaaaagtggagaagttg
tgtgatctgttgcatgaaacaattgtgcggacaaaagagaatattgagaagaaacacgcc
ttgacatatgatgaaattgtacaagaacgcgaagaggacgaggtgcaacccgagtctgaa
agtgatgatgaggatcagcagatatacaatcccctaaagttacccatgggttgggatgga
aagcctataccctactggttgtataagcttcacgggcttggtcaggagttcaaatgtgag
atatgtgggaaccacagttactggggccgcagagcctatgagcgccatttcaaggaatgg
agacaccaacatgggatgcgatgtcttgggattcctaataccaagaattttaatgaaata
acgtcaattgaggaagcaaaacaactttgggagaaaatacaagaaaagcaaggactaaac
aaatggcggccagatcttgaagaagagtacgaagaccaagagggcaacatttataacaag
aagacttatactgatctacaacgtcagggtttaatttaa

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