Sesamum indicum (sesame): 105167773
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Entry
105167773 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105167773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105167773
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105167773
Complex C
U4/U6.U5 tri-SnRNP related factors
105167773
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
105167773
NCBI-ProteinID:
XP_011085891
UniProt:
A0A6I9TWW1
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Position
LG8:5396082..5401249
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AA seq
435 aa
AA seq
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MAEIKSSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYVTVTHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYIADPKTLWSWYEPYL
KDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRTVVANLENMKLPSKHC
GVTGESTRGSEETARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTVTPSYDRDDDSRR
SPNRHRSQSRDLSDREXXXXDRERDRGRERDRERDRGRERDRSRDRDRDRERERERGRDR
DRDRDRESIRERDRERDRDRRYDYDRRSRDSYRRDYDSHRSDHDEHYHREGSSRRSRSRS
RSRSTSRSIYGHDQSRPSPSGHDSKEKASASSNLAKLKDLYGDLSNQKEDAGKDKGPNRP
SGTEEVIRLGGSTWR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgagataaagtcatctgggaggccaattgatcaattgttggagaaggtcctttgc
atgaatatactttcttctgattacttccgggatcttctaagattgaagacatatcatgaa
gtgattgatgaaatttatgttactgtcacacatgtcgagccatggatgactggcaactgt
cggggcccatcaactgcgttctgccttctttacaaattcttcaccatgaaactcactgtc
aaacaaatgcatggcctgttgaagcacccagattctccttacataagagctataggattt
ctttatttgaggtatattgcagatccgaagacattatggagttggtatgaaccatatcta
aaagatgatgaggaattttctcctggttctaatggccgaatgactacaatgggtgtttac
attcgggatttgcttcttggacagtattacttcgacacacttttcccccgtatacctgtt
cctgttatgcggacagttgtagccaatcttgaaaatatgaaactgccttcgaaacactgt
ggagttactggtgagtccacccgtggatctgaggagactgccaggaggccaccttctgtc
aaagccgccctctctgtctcttttggtcagcgtgctcctcatcgtgcatcaactagggat
tcatctcccgttcgtcgtacggttactccatcttatgacagggatgatgattcaagacgg
tctccaaatcgtcaccggagccagagccgagatttatctgatcgagaannnnnnnnnnnn
gacagggagagggacagaggcagggagagagacagggagagggacagaggcagggagaga
gatcgctctcgcgatcgtgaccgagatcgagagagggaacgagaaaggggcagagacaga
gatagagatagagacagagagtcgataagagaaagggacagagagagggatagagatagg
aggtatgattatgatagaaggtcccgagatagctataggagggattacgatagccatagg
agcgaccatgatgaacactatcacagagaaggtagctcccgccgtagcaggagtaggagt
aggagccggagtacaagtcggagcatttatggacatgaccagagtcgtcctagtccctct
ggacacgacagcaaggagaaggcatctgcatctagtaatcttgccaagcttaaagatctg
tacggtgacttgagcaatcaaaaggaggatgctggcaaggacaagggtcctaacaggcct
agtggtactgaggaggtgatcagactcgggggttctacgtggaggtag
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