Sesamum indicum (sesame): 105168651
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Entry
105168651 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105168651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105168651
Spliceosome [BR:
sind03041
]
Complex A
U1 snRNP components
U1 related factors
105168651
Complex B
105168651
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
105168651
NCBI-ProteinID:
XP_020551510
UniProt:
A0A8M8V517
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Position
LG8:complement(11004314..11010470)
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AA seq
798 aa
AA seq
DB search
MRHRCQMVIRLCLSLFPKVPCLLRTMLTVECSYASVIQGVPRYPSPYAPMIRPAFPPRPL
VGVMPPLARPPLVGVRPPIIPPVVRPPSTPTVTSAEPQTTVYVGKISSTVENDFMLSLLQ
LCGPVKSWKRPQDPTGTLKGFGFCEFESAEGVLRALRLLNKLSVDGQELMLNVNQTTREY
LERYVEKKCESSTKTKESETESGEKEEASASGADANETTRSSEEPLKPASDEQKKDDNEM
NKETPDAANFGLVTDEDRKADSEALEKLTGMIEERLKSKPLPPPPPQRAVDGAANSNAEQ
PSWSRDRESEEDVAKNDSEDKNEDQKTAESKPSSEHDKNETGSPDRSRRRDRSRDRDRDR
EMRRDKERELERYEREREQERAKREKEREYRSREDERRFKAREKXXXHWRKREREREKER
AQERKWEIMDQERDGDDGYGKKRKYKTSDEERKRRQREKEEDLADRLREEEEIAEAKMKA
EEEQKKQLEALKTLINQPANGHETAILPNENNDENHDEADQAFAHKPSHGTSEGEGFLQN
GTSDEFVISSNSASDARQTSSLPTRKLGFGLSGSGKRAAVPSVFNEDEDEDAHKEKKMRP
LVPIDYSTEEQQAVQPSMSEGPSANMAAAAEFAKRISTLNPKEEKPDVEKEKSRRSHERS
SQRDRDRHEEGISNREESRRPENQKLLDAKQLIDTIPKTKDELFSYEINWVIYDQNALHE
RMRPWISKKITDFLGEEEDTLVDYIVSSTQEHVDAGEMLERLQTILDDEAEMFVLKMWRM
LIFEIKKVETGLAPRLRA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccgatgccaaatggttatccggctatgcctcagcctcttccccaaggtgcca
tgcctcctccggactatgctaacagttgagtgcagctatgcctctgtcattcaaggagtt
cctcgttatccttctccttatgcaccaatgatccggccagcttttcctccacgaccattg
gttggtgttatgcccccattggcgcgccctccgcttgttggagttcgtcctccgatcatt
cctcctgttgttaggccgccttctaccccaactgttacatcagcagagccacagacaact
gtctacgtcggaaagatatcatcaactgtggaaaatgatttcatgctgtctctcctgcaa
ctctgcggccctgtaaagagttggaaacgtcctcaagatcccactggcactttaaaaggt
tttgggttctgtgaatttgagtctgctgaaggagttcttcgtgccctgcgattgcttaat
aagcttagtgttgatggacaagagttgatgttaaatgttaatcaaacaactcgagaatat
ctagaacgttatgtagagaaaaaatgtgaaagttcaacgaaaactaaagaatcagagact
gaaagtggtgaaaaagaggaagcaagtgcatcaggtgctgatgctaatgagacaacaagg
tcctctgaagaacctttgaagcctgcctcagatgaacagaaaaaggatgacaatgaaatg
aataaagaaactcctgacgctgccaattttgggctggtaactgatgaagacaggaaagca
gatagtgaggctcttgagaagctcacaggcatgatagaggagaggttgaagagcaaacca
ctaccacctccacccccacaaagagctgttgatggtgctgccaactcaaacgcagaacag
ccttcttggtcaagggatagggaatcagaagaagatgtagcaaagaatgattcagaagac
aaaaatgaagatcagaagactgctgaaagtaagccttcaagtgaacatgataagaatgaa
acaggttcacctgataggagcagaaggcgtgataggagcagagaccgagaccgtgatcgt
gaaatgagacgagataaggagagggaactagaacgatacgagagagaacgggagcaagaa
cgagctaagagggagaaggagagagaatataggagtcgggaagatgaacgcaggttcaag
gcacgtgaaaaagnnnnnnnncattggcggaagagggagcgggaaagagagaaagagagg
gctcaggaaaggaagtgggaaattatggaccaagagcgtgatggtgatgatgggtatgga
aagaagaggaaatacaagactagtgatgaagagaggaaaaggaggcaaagggagaaggaa
gaggaccttgccgacagattgagagaggaagaagagattgcagaagctaaaatgaaggcc
gaggaagaacagaagaaacagcttgaggcactgaagactctaattaatcaaccagctaat
ggacatgagacagctattttgccaaatgaaaacaatgatgaaaaccacgatgaggctgat
caggcatttgctcacaaaccaagtcatgggacttctgaaggtgaagggttcttacagaat
ggcaccagtgatgaatttgttatatcatctaattcggcgtcagatgcaaggcaaactagc
agtttgcccactagaaagttgggatttggtctttcggggtctggaaaacgagctgctgtt
ccgtctgttttcaacgaggatgaggatgaggatgcacataaggaaaagaagatgagacct
ctggttccaattgattactcaactgaggaacagcaggcagttcaaccttccatgtctgaa
ggcccatctgccaatatggctgcagcagcagaatttgctaagcgtatttcaactttgaat
cctaaagaagagaagcctgacgtagaaaaagaaaaaagtaggcgttctcatgagagatct
agccagcgagatcgagatagacatgaagaagggattagtaaccgtgaagaaagcagaaga
ccagaaaaccagaagcttttggatgctaaacagttgattgacacgattccaaagaccaaa
gatgaattgttttcgtatgagataaattgggtgatctacgatcagaatgctctgcatgag
agaatgagaccatggatatccaagaagattacggacttcttgggagaggaggaggataca
cttgtagactacattgtttctagcactcaagagcatgttgatgcaggtgagatgcttgaa
aggctccaaactatattggatgatgaagctgagatgtttgtgctgaagatgtggagaatg
ctcatctttgagatcaagaaagtagagactggcctagcccctaggttaagggcctaa
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