Sesamum indicum (sesame): 105170333
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Entry
105170333 CDS
T04135
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sind03016
]
105170333
Enzymes [BR:
sind01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
105170333
Transfer RNA biogenesis [BR:
sind03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
105170333
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
MMU163
Motif
Other DBs
NCBI-GeneID:
105170333
NCBI-ProteinID:
XP_011089356
UniProt:
A0A6I9TS26
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Position
LG9:2503932..2506649
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AA seq
245 aa
AA seq
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MAPRWKGRAAEAKALAEPLSKIVSRLQSSLVESNCQGLLSGCSVLLAADPEQTELFNHAC
FGRPIITSEKDKQWFQLSLEEALYLCSVMKCIKIVGDDKCVKDEEQLWHYMTSKRACFPI
LFKAYSHLRMKNWVVRAGSQYGVDFVAYRHHPALVHSEYAVLVLSDEEGDRSARLRVWSD
FHCTLRLCGSVAKTLLVLHVSKNGNGAMSSSSLEHYCVEERIVTRWNPEQSRENQAIVQK
KLCKS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaggtggaaaggaagagcggctgaagcaaaagccctggccgaacccttgtcc
aaaattgtatctcggcttcaatcctctttggttgagtctaattgtcaaggactgctttca
gggtgtagcgtgcttcttgcagcagatcctgagcaaactgaactgtttaaccatgcatgt
tttggtcgtcccattattacctcagagaaggataagcaatggtttcaattaagtctcgag
gaagctctttacttatgctctgtgatgaaatgcatcaaaattgttggtgacgataagtgc
gtaaaagatgaggaacagttgtggcactacatgacgtccaagagggcttgtttcccaatt
ttgttcaaagcatattctcatcttcgcatgaagaactgggtggtgagggcaggatctcag
tatggcgttgactttgttgcatatcgtcatcatccagctctagtgcactctgaatatgcg
gttctcgtcttatccgatgaagagggagacagaagcgcccggctgagggtttggtccgat
tttcattgtacacttcgactttgtggtagtgttgcaaaaactttgttggttcttcacgtc
agcaaaaatggtaatggtgctatgtcttcttcaagtttggagcattactgtgttgaggag
aggattgtcaccaggtggaatcccgagcaaagccgcgagaaccaagcaattgtacagaag
aagttatgcaagtcatga
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