Sesamum indicum (sesame): 105176596
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Entry
105176596 CDS
T04135
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105176596
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105176596
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF1803
Motif
Other DBs
NCBI-GeneID:
105176596
NCBI-ProteinID:
XP_011097759
UniProt:
A0A6I9UCZ1
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Position
LG14:495989..497874
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AA seq
399 aa
AA seq
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MSKIFLIFIALLLHLPILCSRPVTHLSSPIQWRSIKNSTDQLGRGSCRTGNPIDDCWRCD
PDWEANRKVLADCGIGFGRNAIGGRDGEFYVVTSEGDDPKNPSPGMLRHAVIQDVPLWII
FDHDMNIRLKEELMMNSYKTIDGRGFNVEISNGPCITIQGATNIILHGIYIHNCIPAGNA
VVTDAPRHYQLRGISDGDGISIFGAQDIWIDHCTLANCYDGLIDIVYGSTAITISNNYMF
QHNEVMLMGHSDDFVADKNMQVTIAFNYFGEGLVQRIPRCRHGYFHVVNNVYTGWKMYAI
GGSANPTINSQGNVFIALDDDAPKEVTKRETPEGDGEWKRWNWRSDGDVLLNGAYFTASG
NRTPESYTKASSMVARPASLLTSIIPSAGVLSCKIGQLC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatctttctcatattcattgccttgctcttgcatcttcctatactttgttcg
cgtccggtaacacatctgtcgtcaccaattcagtggagatcaattaagaactcaacggac
caactgggacgagggtcgtgcaggacgggtaatcccattgatgattgctggagatgtgat
cccgattgggaagccaaccgtaaagtgctggcggattgtggaattgggttcgggcgcaat
gccattggcggacgagatggcgagttctatgttgttacatctgagggtgatgaccccaag
aacccaagcccaggcatgcttagacatgcagtcatccaagatgtacccctatggatcatc
tttgatcatgacatgaacattaggttgaaagaagagctcatgatgaactcatataagacc
atagatggtagaggattcaatgttgagatatcgaacgggccatgcataaccatacaaggt
gcaactaatatcatcctccatggaatttatatacataactgtatcccagcagggaatgca
gtggtgacggatgcaccacggcattatcaactacgaggcatttcagacggggatggcata
tcgatttttggggcacaggacatctggattgaccattgtacgttggcaaactgctacgac
ggccttattgatatagtttatggatcgacagctataaccatctcaaacaactatatgttt
cagcataatgaagtcatgctcatgggccatagcgatgattttgttgcggacaagaatatg
caagtcaccattgcttttaattattttggagaaggtttagttcagagaattcccaggtgt
agacacggatactttcatgttgtaaacaacgtatacacggggtggaagatgtacgcgata
ggaggaagtgcgaatccaaccatcaatagtcaaggcaacgtcttcattgcattagacgac
gatgctccaaaggaggtcacaaaacgtgaaacgccagagggagacggcgagtggaagaga
tggaactggagatcggatggggatgtgttgctaaatggagcctacttcacagcttctgga
aatagaactccagaaagctacacaaaagcatcgagcatggtcgcaagaccggcttcgctt
cttactagcattataccatccgccggggtcctcagctgcaagattggccaactctgctaa
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