Sesamum indicum (sesame): 105177853
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Entry
105177853 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105177853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105177853
03400 DNA repair and recombination proteins [BR:
sind03400
]
105177853
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105177853
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105177853
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
105177853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
RWD
FANCL_C
Motif
Other DBs
NCBI-GeneID:
105177853
NCBI-ProteinID:
XP_011099421
UniProt:
A0A6I9UMI1
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All DBs
Position
LG15:4448358..4453273
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AA seq
329 aa
AA seq
DB search
MSTSFSRKIYSEVEEVGWEHLVRMGEDLTFLSFRVMDTKGRVHILEITLDKTYPRCPPSV
SVDAPYNFSLEWSSHSKLRDVVRQFQKHVDKLQGFWSTLDDIDRSFWVIDPKHSHYAMSY
RQIKLGNDCSVILSINANDPLSLPECRFLGSDNTVNFLRDIWKRNCTRWAKDKSFPENLA
RVFDTQLPQPPHVQKNEEQVECGICYAQYLPIGTSMMNLVPRVEGQLIIHVKMETVIEHS
TVFVLVIGSAPLRQQGSHSMFYLGTALTVQTPLQSKSAPRRNILLHLQHKKGIFSCLKER
LFLLLSNLHTRNCLVQPIFVDTGRHPYLS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcgttttcccgcaagatatactcggaggtagaagaggttggatgggagcac
ttagtgagaatgggggaagacttaacgtttcttagctttcgtgtcatggacactaaggga
agagtgcatattcttgagataacactggacaagacctacccaaggtgtcctccttcagta
tcggtggatgcgccttataattttagtctagaatggtcatcgcattcaaagttacgagat
gttgttcggcaatttcaaaagcatgtggataagctccagggtttttggtccacgttggat
gatattgatcggtctttttgggtaattgatccaaagcattcacattatgcaatgtcatat
cgccaaataaaattagggaatgattgctctgtcatattgtctataaatgccaatgatcca
ttatccctgcccgagtgccgcttcttgggttcagataacacagtcaactttctgagggat
atttggaagagaaattgcacaagatgggcaaaagacaagtcatttcctgaaaatcttgca
cgtgtttttgacactcagttaccccaacctccacatgtccaaaagaatgaagaacaagtt
gagtgtggcatttgttacgcccaatatcttccgataggtacttcgatgatgaacttggtg
ccaagagtggaagggcaactgattatacatgtgaaaatggaaactgtaatcgagcattcc
acagtgtttgtcttggtgattggctccgctccattacgacaacaaggcagtcattcgatg
ttctatttgggaactgcccttactgttcagaccccattgcagtcaaaatcagcaccaaga
cgtaatattttactgcacttacagcataaaaaaggaatattttcctgtctgaaggaacga
ttattcctgttactatctaatctccacacgagaaattgtcttgtgcaacccatttttgtt
gatactggcaggcacccatatctgagctaa
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