Sinirhodobacter sp. HNIBRBA609: O5O51_05965
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Entry
O5O51_05965 CDS
T08716
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr00190
Oxidative phosphorylation
sinr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
O5O51_05965
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O51_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinr03019
]
O5O51_05965
Enzymes [BR:
sinr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
O5O51_05965
Messenger RNA biogenesis [BR:
sinr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O5O51_05965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WBL34248
LinkDB
All DBs
Position
complement(1220186..1222351)
Genome browser
AA seq
721 aa
AA seq
DB search
MTKADFLKTPFPTPVEMPAEVIAGPRRFFNRELSWLAFNWRVLDEATNPRVPLLERLRFL
SISATNLDEFYTVRVAGLRELVREGSITPSHDGLTPAEQLVLINADARKLMDTQQTTWNK
LKRELEGVGIHLVTRSKLTKRDRDFLADHFLNKVFPVLSPLAIDPAHPFPFIPNTGFCLA
LELERQTDKRRLQALLPIPQQIDRFVRLPGEARFLPLEELLLLHLNMLFPGYADTGHCAF
RVLRDSDLEVEDEAEDLVREFETALKRRRRGQVIRMKITAGAPESLRALIMDELHVDPSE
VVEVRGMLGIADLKELVLSSRSDLLWPAFTPRVPERVQDHDGNMFSAIRQKDMLLHHPYE
TFDMVIRFLNQAAADPNVLAIKQTLYRTSKDSPIVDALCEAAESGKSVTALVELKARFDE
AANIRQSRRLERAGAHVVYGFINYKTHAKISTVVRREGDQLVTYTHYGTGNYHPITARIY
TDLSFFTCDAALGRDATKVFNYLSGYVQPEGLENLAISPISLKPRLLELIARESEHARNG
RPAEIWAKMNSLIDAQVIDALYAASQAGVKISLVIRGICGLRPGIKGLSENIRVKSIVGR
FLEHSRIVCFGNGHGLPSKKARVFFSSADWMGRNLNRRVETLVEALNDTVKAQIVSQIMA
ANMADEAQSWVLQPDGRFLRDLPPGKDDLFSCHRFFMENPSLSGRGSAGAKDVPKLAHSM
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcagattttctcaaaaccccgttcccgactcctgtcgagatgcccgccgaa
gtgatcgcgggcccgcgtcgtttcttcaaccgagagctttcgtggctcgcgttcaactgg
cgcgtcctcgatgaggccacgaacccgcgcgtcccgcttctggagcggctgcggttcctg
tcgatctcggcgaccaacctcgacgagttttacaccgtccgcgttgcgggcctgcgcgaa
ctggtgcgcgagggcagcattaccccctcgcatgacgggctgaccccggccgagcagctt
gtgctgatcaacgcagacgcgcgcaagctgatggacacgcagcagaccacctggaacaag
ctcaagcgcgagctggaaggtgtgggcatccaccttgtcacgcgctccaagctgaccaag
cgcgaccgtgacttcctggcggatcacttcctcaacaaggtcttcccggtgctctcgcca
ctggcgatcgacccggcgcaccctttcccgttcatccccaacaccggtttctgcctggcg
ctggaactggagcggcagaccgacaagcgccgccttcaggcccttctgccgatcccgcag
cagatcgaccgctttgtgcgcctgcccggcgaggcgcgcttcctgccgctggaagaactg
ctgctcttgcatctcaacatgctcttccccggttatgccgacaccgggcattgcgccttc
cgggtgctgcgcgatagcgaccttgaggtcgaggacgaagccgaagacctcgtgcgcgaa
ttcgagaccgccctgaaacgccgccgccgcgggcaggtcatccgcatgaagatcaccgcc
ggcgcgcccgaaagcctgcgcgcgctgatcatggacgagttgcacgtcgatccctccgag
gtggtcgaggtgcgcgggatgcttggcatcgccgacctcaaggagttggtgctgtcgtcg
cgctccgatctgctttggcccgcattcacgccgcgcgtgcccgagcgggtgcaggaccat
gacggcaatatgttctcggcgatccgccagaaagacatgctgctgcatcacccctacgag
accttcgacatggtgatccgcttcctcaaccaggcggcggcggacccgaacgtgctggcg
atcaagcagaccctctatcgcacctcgaaggacagcccgatcgtggacgcgctctgcgag
gccgccgaaagcggcaagtcggtaacggcgcttgtggaactcaaggcgcgttttgacgag
gccgccaacatccgccagtcgcggcggctggagcgtgcgggcgcccatgtcgtctacggg
ttcatcaactacaagacgcatgccaagatctcgaccgtggtccggcgcgagggcgatcag
ctggtcacctatacccattacggcaccggcaactaccatccgattacggcgcggatctac
acggacctgagctttttcacctgcgacgccgcgcttggccgcgacgcgaccaaggtcttc
aactacctttcgggctatgtgcagcccgaggggcttgagaaccttgcgatttcgccgatc
tcgctcaagccgcgccttctggaactgatcgcgcgcgaaagcgagcacgcccgcaatggc
cgcccggccgagatctgggccaagatgaacagcctgatcgacgcgcaggtgatcgacgcg
ctttatgccgcgagccaagccggggtgaagatcagccttgtgatccgcggcatctgcggg
ctgcgccccggcatcaagggcctgtccgagaatatccgcgtgaaatccatcgtcgggcgc
ttcctcgaacattcgcgcatcgtgtgctttggcaacggccacggcctgccctcgaagaag
gcgcgggtgttcttcagctccgccgactggatggggcgcaacctcaaccgccgggtcgaa
acgctggtcgaggcgctcaacgacaccgtcaaggcacagatcgtcagccagatcatggcc
gcgaacatggccgacgaagcgcaaagctgggtgctgcaacccgacgggcgcttcctgcgc
gacctgcctccggggaaagacgatctgttctcctgccaccgattcttcatggagaacccc
tcgctttcgggccgtggttcggccggggcaaaagacgttccgaaacttgcccatagcatg
gactag
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