Setaria italica (foxtail millet): 101757039
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Entry
101757039 CDS
T02818
Name
(RefSeq) DNA topoisomerase 6 subunit A3
KO
K10878
meiotic recombination protein SPO11
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101757039
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
101757039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
AhpC-TSA_2
AhpC-TSA
Topo_VI_alpha
Redoxin
Motif
Other DBs
NCBI-GeneID:
101757039
NCBI-ProteinID:
XP_012698521
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All DBs
Position
IX:complement(49488300..49493982)
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AA seq
647 aa
AA seq
DB search
MAARAPLAMLHAAASASPRPAAAPVATRPAAPCLRARGTGGVPIIYHQRPAQRTRSLLLP
AARPGAIGSAAEAAPAEGLAQKLQGVEVFDLSGKAVPIVDLWKDRKAVIAFARHFGCVLC
RKRADLLAEKQDVMQAAGVALVLIGPGSVEQANAFCEQTKFKGEVYADPTHSSYDALEFA
FGLFSTFTPAAGLKIIQLYREGYRQDWELSFEKNTRTKGGWYQGGLLVAGPGIDTILYIH
KSLRSKLRPDASILATLRSLASASASSSKSKAAAKFLADHDPPDDPTSSYIVVADQDSAS
VTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLLHRESARPFANVATA
RKATVTARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQSQSDAVLDDVSCMLGCTRSSL
HVVASEKGVVVGRLVFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVEKDAA
FMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKILSVY
MCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVK
QNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgcgccgctcgccatgcttcacgccgccgccagcgccagcccgcgaccg
gccgcggcacccgtggccacgcgcccagccgcgccgtgccttcgcgcgaggggcacgggc
ggcgtccccatcatctaccaccagcggccagcgcagcggacccgcagcctcctccttcct
gccgccaggcctggagccatcgggagcgccgcggaggccgcgccggcggaggggctggcg
cagaagctgcagggggtggaggtgttcgacctgagcggcaaggcggtgcccatcgttgat
ctgtggaaggacaggaaagccgtgatcgcgtttgcccgccatttcgggtgtgtgctgtgc
cggaagagggccgatcttcttgcggagaaacaggatgtcatgcaagctgctggagttgct
cttgttttaattggaccaggtagtgttgaacaggcaaatgcattttgtgagcaaaccaaa
ttcaaaggagaagtatatgcagacccaactcactcatcatacgacgctcttgaatttgca
tttgggttgttctcaacctttacaccagcggctggcctcaagataatacagttgtatagg
gaaggatacaggcaggactgggaattgtcattcgaaaagaacaccaggacgaaaggggga
tggtatcaagggggactacttgttgcaggtcctggtatcgacaccatcttgtacatccac
aagtccctccgctcgaagctccgccccgacgcctccatcctcgccaccctccgctccctc
gcctccgcctccgcctcctcctccaagtccaaggccgccgccaagttcctcgcggaccac
gacccccccgatgaccccacctcctcgtacatcgtggtggccgaccaggactccgcctcc
gtcacctcccgcatcaaccgcctcgtcctcgccgccgcgcgcagcatcctctccggccgg
ggcttctccttcgcggtgccctcccgcgccgcctccaaccaggtctacctcccggacctc
gaccgcatcgtgctcctccaccgcgagtccgcgcgccccttcgccaacgtcgccaccgcg
cgcaaggccaccgtcacggcccgcgtcctctccctcgtccacgccgtcctccgcaggggc
atccacgtcaccaagcgtgacctcttctacaccgacgtcaagctctttggcgaccagtcc
cagtccgatgcagtcctcgacgacgtctcctgcatgctcggatgcactcggtcctcgctc
catgtcgtcgcctccgagaagggcgtcgtcgtcggccgcctcgtcttcgccgacgacggg
gaccggatcgactgcacgcgcatgggtgtcggtgggaaggccatcccgcccaacatcgac
agggtctcgggcatcgagagcgacgcgctcttcatcctgctggtggagaaggacgctgcg
ttcatgcgcctcgccgaggacaggttctacaaccgcttcccctgcatcattctgacggcg
aaggggcagccggatgtcgccacccggctgttcctgcggcggctcaaggtggagctgaag
ctgccggtgctcgcactggtggactctgatccatatgggctcaagatcttgtcagtgtac
atgtgtggttccaagaacatgtcctatgacagtgccaatctgacgacgccagacatcaag
tggctaggggtccggccgagcgacctggacaagtacagggtgccagagcagtgccgtctc
cccatgaccgatcacgatatcaaggtggggaaggagctgctcgaggaggactttgtgaag
cagaatgagggctgggtgaaggagctggagacgatgctgcgcaccaggcaaaaggctgag
atacaggccctcagctcctttgggtttcagtacctcaccgaggtctatctgcctctcaag
ctgcagcagcaggactggatttga
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