Setaria italica (foxtail millet): 101784888
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Entry
101784888 CDS
T02818
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101784888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101784888
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101784888
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
PEX-2N
Motif
Other DBs
NCBI-GeneID:
101784888
NCBI-ProteinID:
XP_004971651
LinkDB
All DBs
Position
V:complement(8476649..8478301)
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AA seq
359 aa
AA seq
DB search
MWARLGVVCESVVERDPPPILLCHCIGSTPINMSLHDFQEYLNLQRRTFVQYYRCLSTSL
LNKENLDEDSNFLIMPPSALDRLTGLNIEFPMLFQIKNPSTELATHCGVLEFIADEGFIH
MPSRLMAHLGIQENEVVLVRNTRLPTATFVKLRPHTTDFLGVSHHKELLEYNIRNKFQCL
TAGETIAVAEGDRRFYLDLLETRPADAVCTLNTDCEVDFAPPLDYVEPPRAPAPAPVASS
QGSGEPPQFTGAAARMDGKPVEQPPPAPVPAGGRHGDQPRQPAQFTGVAMRMDGKPVELP
PPPTPSPAAASAGALGAPKRKIRFDAPAAGSGVSKGKEGAGAGKEQEKRFSGTQYSLKD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcccggctcggtgtcgtgtgcgagtcggttgtggagcgggatccgccgccgata
ctgctctgccactgcatcgggagcacccccataaatatgagccttcacgatttccaggag
tacctcaacctgcagcggcgaacgttcgtgcagtactaccgctgcctgtcgacctctctc
ctgaacaaggagaatctcgacgaggacagcaactttctgatcatgccgccatctgccctc
gatcgcctcaccggcctcaacatcgagttcccgatgctgttccagatcaagaaccccagc
acggagctcgccacgcactgcggcgtgctcgagttcatcgccgacgaagggttcatccac
atgccgagcaggctgatggcgcacctggggatccaggagaacgaggtcgtgctggtgagg
aacacgaggctgccgacggccaccttcgtcaagctgcgtccgcacaccacggacttcctc
ggcgtctcccaccacaaggagctgctcgagtacaacatccgcaataagttccagtgcctc
accgccggcgagacgatcgcggtggcggagggggaccggcggttctacctcgacctgctg
gagacgcggccggccgacgcggtctgcaccctcaacaccgactgcgaggtggacttcgcg
ccgccgctcgactacgtggagcccccgcgcgcaccggcgccggcgcccgtcgccagcagc
cagggcagcggcgagccgccccagttcaccggcgccgcggcgcggatggacggcaagccg
gtggagcaaccgccgcccgcgccggtgcccgcgggcggcaggcatggtgaccaaccgcgg
cagccggcccagttcaccggcgtcgcgatgcgcatggacggcaagccggtggagctgcca
ccgccgcctacgccgtctccggcggcagcgagcgccggtgctctgggtgcgccgaagagg
aagattcgatttgacgcgccggcggctggcagcggggtgagcaagggcaaggagggcgcc
ggcgccggcaaggaacaggagaagcggttttcggggactcaatattccttgaaggactga
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