Setaria italica (foxtail millet): 101785049
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Entry
101785049 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101785049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101785049
03036 Chromosome and associated proteins [BR:
sita03036
]
101785049
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101785049
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101785049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101785049
NCBI-ProteinID:
XP_004977666
UniProt:
K3Y517
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All DBs
Position
VII:35920614..35927506
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AA seq
920 aa
AA seq
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MFGSTNPFGQSSTSPFGQNSFGTQQGFGQATPAANNPFAPKPFGSPTTAFGAQTGGSPFG
TASTGAFGQQQSTPTFGTTSTGAFGQQQSTPTFGTPSSSPFGSTPAFGASPAPAFGATSS
TFGSGSLFGQKQSFGGFGSSPSQSSPFGSTFQQTQPTFGSSTFGASTTPAFGTTTTPAFG
ATAPAFGTSTPAFGTATTPAFGSTSTSTSLFGASSTPAFGSSTPGFGTSGSTAFGVGGTA
PGFGSSSTPSFGTSTNAFSFGSSPSFAQTAVSSGSSPFGTTSPFGAQTPAFGSQTAAAAF
GQAQFGNQAGGTRIKPYAQTPDVDGATSATQPAAKLDSISAMPEYKDKSHEELRWEDYQR
GDKGGPNPSGTPAAAPIFPSLSTQQNAFAPTSNVFNQSTPSAIPTNNPFAPKPVSTSASP
FNSFNSTVASSSPFASSTSTTMFGQTGVSPFQASSSPSLFANTTPFASSSLFGTSTTNNP
NPFGTVSSLANTQSAPLFQSAPTFAQPSSTPAFSSGNLFSTPPGSLFGGGPSLFSTPTFQ
TSAPVQTPNTFSFQPPTQPASTGGFPGFSNTANQALIGQQSPSQSNMVMQPAPISNPFGT
LPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLPTRTLSMAVPRHLSQRRIKLLPRKYNPI
SDGKVPFFADDEESPATPKADAFFIPRENPRNLIIRPIEQWPSRSAINRQSVPKDSTDLD
KYEDTSTESGRDKTVKSPRSSPLVENGQQHEPSHHGNGKGTSVERLLPKLPQEDYFTEPS
LEELAAKERGEPGYCSRVKDFVVGRHGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKD
DSKKPPVGEGLNKAAEVTLLNIKCMNKKTGDQYREGPRVERYRDMLMMKAEEQGAEFVSF
DAAKGEWKFRVKHFSTYGLW
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccatttgggcagtcatccaccagcccatttggacagaactca
ttcggaacccagcagggattcggccaggctacacctgctgctaacaacccctttgcgcca
aaaccgtttggcagcccaaccacagcttttggggcacagactggaggctcgccttttggc
actgcatccactggtgcctttggccagcagcagtccactcccacatttggcactacatcc
actggtgcctttggtcagcagcaatccactcccacgtttggcaccccgtcctcctctcca
ttcgggagcactccggcgttcggtgcatcgcctgcccctgcctttggtgctacatcctct
acctttggctctggatctttattcggacaaaagcaaagttttgggggttttggatcatca
cctagccagtcaagtccttttggtagcacgttccagcaaacacaaccgacatttggcagc
agcacttttggcgcatcaactacgccggcattcggtaccacaactacgccggcatttggt
gcaaccgcgccagcctttggaacgagtacaccagcctttggcaccgcaactaccccagca
tttggttcgacatcaacatcaacatctttatttggtgcttctagcaccccggcgtttggt
tcatctactcctggttttggaacttcagggagcacagcatttggtgtgggtggtactgct
ccaggttttggatcttcgagcacaccttcattcggcacatcaaccaatgcattcagtttt
ggttcttcaccatcttttgcacaaacagcagtttcctctggtagttctccctttggaaca
acatcaccttttggtgcgcagactccagcatttggctcacagacagcagcagcagctttt
gggcaagcacaatttggtaatcaagctggaggaaccagaataaaaccttatgctcaaaca
ccagatgttgacggtgctaccagtgctactcaacctgctgcaaaacttgattccatatct
gcgatgcctgaatacaaagacaagagtcatgaagaattgaggtgggaagactaccagcgt
ggagacaagggtggaccaaacccttctggaactccagcagcggctcctatctttccatca
ttaagtacacaacagaatgcttttgctccaacaagcaatgtatttaaccagtctacccca
agcgcaattccaacaaacaatccatttgctcctaagcctgtttcaactagtgcttcacca
ttcaactcgtttaacagtacagttgcaagttcgagcccattcgcatcgtccactagtacc
acaatgttcggacagacaggtgtttccccatttcaagcaagtagctcaccatctttgttt
gcaaataccactccttttgcttcatcatcgttgtttggcacatcaactacgaataatcca
aatccattcggcactgtctcgtcattggctaacactcaatcggccccactatttcaatct
gccccaacatttgcacaaccgtcaagtacaccagctttctcctctggaaacctatttagc
acaccacctggcagtctgtttggcggcggaccttcacttttttcaacgccaacatttcag
acatctgcacctgttcaaacgccaaacacattctccttccaacctccaactcaaccagct
tctacaggtggtttccctggtttttccaacactgctaatcaggccctcattggacaacaa
tctcctagccagtccaatatggtcatgcagcctgctcctatttcaaatccatttgggaca
cttccagcaatgcctcagatgtccattgggaatggcggatcttctccttcagttcaatat
ggaatatcaagtctgccggttgctgagaagcctcttccgactagaacattgtccatggcg
gttcccaggcatttgtcacagagaaggataaaattgctgccaagaaaatataatccaata
tcagatggcaaggttccattctttgctgacgatgaggaatctccagcaacaccaaaagcg
gatgcttttttcatccctagagagaacccgaggaatctgataatccgtccaattgagcag
tggccttcgcggagtgcaattaacaggcaatcggttccaaaggattcaactgatttggac
aaatatgaagatacgtccactgaaagtgggcgtgataagactgtcaagtcaccaaggagc
agtcctctggtggaaaatggccagcagcatgaacccagtcatcatgggaatgggaagggt
acttcagttgagaggctgttgcctaagctcccgcaggaagattacttcacggagcctagt
ctggaggagcttgctgccaaagaacgtggtgagccaggctactgcagtcgggtgaaagac
tttgttgtggggcgccatggctatggcagcatcaagttcctgggggagacggacgtgagg
ggcctggatctggagtcaatcgtggagttcaacaaccgggaggtgatcgtgtacaaggac
gacagcaagaagcccccggtgggtgagggactgaacaaggctgcggaggtgactcttctg
aacatcaagtgcatgaacaagaagaccggggatcagtaccgagagggcccgcgggtggag
aggtacagggacatgctgatgatgaaggcagaggagcagggcgcggagttcgtgtccttt
gacgcagccaagggagagtggaagttcagggtgaagcacttcagcacctacgggctctgg
tga
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