Spiroplasma ixodetis: SHM_27960
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Entry
SHM_27960 CDS
T08792
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sixo
Spiroplasma ixodetis
Pathway
sixo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHM_27960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sixo03400
]
SHM_27960
Enzymes [BR:
sixo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHM_27960
DNA repair and recombination proteins [BR:
sixo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHM_27960
Prokaryotic type
SHM_27960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TRF
Motif
Other DBs
NCBI-ProteinID:
BDT05150
UniProt:
A0ABM8BZ81
LinkDB
All DBs
Position
2066534..2067205
Genome browser
AA seq
223 aa
AA seq
DB search
MYNKTLFFDSSWLEFFQQEYKETYFTKLLEDIKKEYQTYLCYPQWEEIFQAFKITPLSKV
KVIILGQDPYHQPNQAHGLAFSVKTNTPLPPSLKNIFQELKNDLNIEKDNDGNLTTWAKQ
GVLLLNTTLTVRQSQPNSHLQYQWVTFTDHVLSFLNLNCTNLVLILWGKNARNKKMLIDT
EKHFIIESAHPSPLSAYNGFFNSRPFSKTNNWLISKNKTPIKW
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtataataaaactttattttttgattcctcatgattagaattttttcaacaagaatat
aaagaaacatattttactaaattattagaagatattaaaaaagaatatcagacttatctt
tgttatcctcaatgagaagaaatatttcaagcttttaaaataactcctttatcaaaggtt
aaagtaataatattaggtcaagatccttatcatcagccaaatcaagctcatggtttagca
tttagtgttaaaacaaatactccattaccaccaagtttaaaaaacatttttcaagaacta
aaaaatgatttaaatattgaaaaagataatgatggtaatttaacaacttgagctaaacag
ggagttttgcttttaaatacaactttaactgtcagacaaagtcaacctaatagtcattta
caatatcaatgagtaacttttactgatcatgttttatcatttttaaatttaaactgtact
aatcttgttcttattttatgaggtaaaaatgcaagaaataaaaaaatgttaattgacaca
gaaaaacattttattattgagagtgcacatccttcacctttaagtgcttataatggtttt
tttaattcaagaccatttagcaaaactaataattgattgatttcaaaaaataaaactcct
attaagtgataa
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