Shewanella japonica: SJ2017_2340
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Entry
SJ2017_2340 CDS
T04959
Name
(GenBank) GGDEF domain-containing protein
Organism
sja
Shewanella japonica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
4HB_MCP_1
CHASE3
AI-2E_transport
Motif
Other DBs
NCBI-ProteinID:
ARD22630
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Position
2793679..2795316
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AA seq
545 aa
AA seq
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MMNMLTRFSLKQKAIAATIVLVLVLLSITLVSLVSFSSTQEKLTKVTSQYQPKMLSAMQL
TSHFYHSLSVLGNYLIEKDDYNMNLYREKVNDINSTLTELVNLTNLNPELDDSEQLLRIR
QLVDKIITHNLSMLELAQNNNKNMPAIGIASSKLEPIAINMNQIVNDLLLATAINEQQSI
LPLIEDLRYNWIMLVSEVRNYLAFRQLPTIDEIALFKTGVNQSFEALEKRRYEMDDDQLD
LLDEFEANTAAYQAALVQAINIHAGNNWRADRQLMKQNTTPTLKELTKELEVLVTKQQRR
IHESNLALSKQISEAENTIRFSIQVALAIALLVIFLSFKNKRLLSDILIHKESERKLFHK
AHHDTLTKLANRAFFDDRLFKMFLDQETRSNRRSKRKDNLDENSHFFGLLYIDLDGFKAV
NDNVGHDAGDFILIEVAKRMKNVVRNSDIVCRLGGDEFAVLLNDINHINSIEKISENLCK
TISQPYHYKEQVLQVSASIGFSYSRHPQLPLHKKVKFRMEAIIKQADTAMYHAKENGKNQ
YAQFK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatgttaactcgatttagtctcaaacaaaaagccatagcagccacaattgtt
cttgtcttagtgctactttctatcacgttagtttcacttgtgagtttttcttcaacccaa
gaaaaactcaccaaggtcacatcgcaatatcaacctaaaatgctcagcgcaatgcaatta
acctcgcatttttaccatagtttgagtgtattagggaattacctcattgagaaagatgat
tacaacatgaacctatatagggaaaaggtaaatgacatcaattccacattaactgaactg
gttaacttaacaaacttaaatcccgaactggatgattctgaacaactattacgaattagg
cagttagtagacaaaatcataactcataatttatcaatgctagagttagctcaaaacaac
aataaaaatatgcctgcaattgggattgcatcgtcaaaacttgagcctattgccatcaat
atgaatcaaatcgttaatgacttattactggcaactgcaattaatgaacagcaaagcatc
ttacctttgattgaagaccttaggtataactggattatgctcgtcagtgaagtcagaaac
taccttgcctttaggcaattgccaaccatagatgaaattgcgctatttaaaacaggtgtt
aatcagtcatttgaagcattagaaaaacgtcgctatgaaatggatgacgatcagctcgac
ctattggatgaattcgaagcaaataccgcggcctatcaggcagcgcttgttcaagcaatt
aatattcatgcaggcaataattggcgagccgatcgtcaattaatgaagcagaacaccaca
ccaacactcaaagagctcacaaaagaattagaggttctcgtcaccaagcaacaacggcga
atacatgaaagtaacctcgccttgtcgaagcaaattagtgaagcggaaaatactattcgt
ttctcaatacaagtcgcgttagcgattgcacttttggtgatattcttatcttttaaaaat
aaacgcttattgagtgatatcttaattcataaagaaagcgagcgtaaactgttccataaa
gcgcaccatgatactttaacaaaactggccaatcgggcattttttgatgaccgactattt
aaaatgtttttagatcaagaaacacgttctaatcgccgctcaaaaagaaaagataacctt
gatgaaaacagtcatttttttggtttactgtatatcgaccttgatggttttaaagccgta
aacgacaatgttggccatgatgcgggtgactttattttgattgaagtagcaaaaagaatg
aaaaatgtggtgcgtaattcagacattgtttgtcgccttggtggtgatgaattcgctgtg
ttactgaatgacattaatcatatcaatagtattgagaaaatctctgaaaacttatgcaaa
acaatcagtcaaccttaccactataaagagcaagtattacaagtcagtgccagtattggt
ttttcatattctagacatccacaattgccattacacaaaaaagttaaatttaggatggaa
gcaatcattaaacaagctgatacggccatgtaccacgctaaagagaatggcaaaaaccaa
tacgcacaatttaaataa
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