Shewanella japonica: SJ2017_2760
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Entry
SJ2017_2760 CDS
T04959
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_2760
Enzymes [BR:
sja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
SJ2017_2760
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SJ2017_2760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Pyr_redox_3
Methyltransf_30
Pyr_redox_2
NAD_binding_7
FAD_binding_2
Pyr_redox
NAD_binding_8
F420_oxidored
DUF3153
Motif
Other DBs
NCBI-ProteinID:
ARD23041
LinkDB
All DBs
Position
3264645..3266825
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AA seq
726 aa
AA seq
DB search
MTQITTDFPIVTRDCATISTNFPSSYCQNPNYAASIRHYYETVLSNKANSTKSCLIGQIG
FGNAMEIMLLWQLSQQLKRPVRLSVFDPYSINSIELGQFLAMPQNQATINSQHLAEFSQQ
LHTACIANIQGCQRLIFDHGQFIVDIYFGDIEHNLKGIQSVEADAVEYWHCLPHTTSTEY
IDHHISEKLFWQMGRLSKDNACFYAYPQEIDRVECSAITVLASQSGFIINAQSGNRDDIS
NTSERSSTPDCDIPAAERKALRYSHQRQYAYCLPSASAQPTNTSTSKESVAIIGGGIAAA
HLALSLVEKGKNVTIYCKDSMLADGASGNKQGAIYPLLTPDNNLMSQYFQQAFLFSRRRL
KQLENAGYAVEHQFCGVLQTGFDERSDARLTKIIQGQAWPSEVAAQVSPSEANMLAGITI
DKPAFYYPWAGWICPHQFAQSAVNYAQAIAKNKGLTVEIRLDTPISELTRQGTLWQLNMT
EQTSDLHPKSPPNSNKNSAVQSFLHSEVVVASGAQLTEYQQTKQLQVTGFRGQVSHIPSK
GQLTKLNSVICAHGYLTPENNQHHCVGASYVKSPDDLRFCPTEQQENAQKMHHSFPQRDW
VSDIDVSDNNARVGVRMVTRDHCPMMGLAPNIDAILNQYNTEPLDQHQLTVASRDFWRHH
SAPVYRGLYVLGGLGSRGLSSGPLAAEALAAMICHQTPPISYDMFAMLNPNRMWLRKLLK
GKSLLS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaaataaccactgacttccctatagttacccgagattgtgcaacaatatcgact
aattttccaagtagttactgtcaaaaccctaattatgcagcaagcataaggcattattat
gaaactgtcttgtccaacaaggcaaactcaactaaaagctgcttgattgggcaaattggc
ttcggtaacgccatggaaatcatgttgttgtggcaattatctcaacaattaaaacgtcct
gtaaggctgagtgtttttgacccctattcaattaacagcattgagttgggtcaattttta
gcaatgccgcaaaatcaagcaacgattaattcacagcacttagcggagttttcacagcag
ttacacactgcttgcattgccaatattcaaggttgtcagcggctcatatttgatcatggt
caattcattgttgatatttattttggtgatattgagcataaccttaaaggtattcaaagt
gtcgaagctgatgccgttgagtattggcattgccttcctcatacgacctcaactgagtat
atagatcaccatatttcagaaaaattgttttggcagatgggaaggttaagtaaagataat
gcatgcttttatgcttatccgcaggaaattgaccgtgttgaatgttcagcgataacagta
ttagcgagtcaatcaggcttcatcatcaatgcgcaaagtggcaatagagatgacattagc
aataccagtgaacgctcaagtacgccagattgcgacattcctgcagctgaaagaaaagca
ttaaggtattcccatcagcgccagtacgcttattgcttacccagtgcaagcgctcaacct
acgaatacatcgacttcaaaagagagtgtggccattatcggcggtggtattgcagcggct
caccttgcactatcgctcgtagaaaaaggcaaaaacgtcacgatttattgcaaagacagt
atgcttgctgatggagcttcaggtaataaacaaggcgctatttatccgcttttaacgcct
gataacaacttaatgagccaatactttcagcaggcttttttattcagtcgacgtaggctt
aagcaacttgaaaatgcaggttacgctgttgagcaccagttttgtggcgtgttacaaacg
gggtttgatgagcgtagcgatgcaagattaactaaaatcatccaaggacaagcttggcca
agtgaagttgcagcccaagtgtcaccaagtgaagctaatatgctcgctggtatcaccata
gataagcctgccttttactacccttgggctggttggatttgtccgcatcaattcgctcaa
tcggccgtaaactatgcgcaagctattgcgaaaaacaaaggacttacagtcgagatcaga
cttgataccccaattagtgaactaactcgtcaaggaaccctttggcagttaaacatgact
gagcaaacctcagacttacaccctaaatccccccctaactcgaacaaaaactctgcggtt
caatcatttcttcattctgaggtcgttgttgcatcaggggctcaactcactgagtatcaa
caaacaaaacaactacaagtcacaggctttagagggcaagtaagccatattccgtcaaaa
ggacaattaactaaacttaatagcgttatttgtgctcatggttatttaacccctgaaaat
aatcagcaccattgtgttggcgctagttatgtaaaatcgcctgatgacttacgtttttgc
cctaccgagcaacaagaaaatgcgcaaaaaatgcatcatagttttccacaaagagactgg
gtgagtgatattgatgtatcagacaacaacgccagagtgggtgtcagaatggtcacaaga
gaccactgtcctatgatggggcttgcaccaaatattgacgccatattaaatcaatataat
accgagcctttggatcaacatcagctcactgtagccagtcgtgacttttggcgccatcac
tccgcaccagtatataggggactttatgttttaggaggactcggctcaagaggactaagt
tcaggacctttagctgcagaagctttagctgcaatgatttgtcatcaaaccccaccgatc
agctatgacatgtttgcaatgctaaacccaaatagaatgtggttaagaaagctattgaaa
ggtaaatctttgcttagctaa
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