Scomber japonicus (chub mackerel): 128357079
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Entry
128357079 CDS
T09718
Symbol
tnnc2.1
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04814
Motor proteins
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128357079 (tnnc2.1)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128357079 (tnnc2.1)
04820 Cytoskeleton in muscle cells
128357079 (tnnc2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128357079 (tnnc2.1)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
128357079 (tnnc2.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF-hand_11
EF_EFCAB10_C
SPEF2_C
EF-hand_STIM1
Motif
Other DBs
NCBI-GeneID:
128357079
NCBI-ProteinID:
XP_053173293
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All DBs
Position
4:complement(6388862..6394935)
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AA seq
165 aa
AA seq
DB search
MVKDEPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREE
LDAIIEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFIDREE
FGDILHLTGEPVVEEDIDELFGESDNNKDGKIDFDEFLKMMENVQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagatgagcccactgacgcccaaagcgatgcccgctccttcctgactgaggag
atgattgcagaattcaaggctgctttcgacatgttcgacaccgatggtggcggtgacatc
agcaccaaggagttgggacaggtgatgagaatgctgggccaaaacccgtcaagggaggag
ttggatgccatcattgaggaggtggatgaggatggcagcggtaccattgactttgaggag
ttcttggtcatgatggtgcaacagttaaaggaggaccaggccggaaagagtgaagaagaa
ctttcggaatgcttccgtatttttgacaagaacggagatggtttcatcgaccgggaggag
tttggagacattctccatctcaccggagaaccagtcgtagaagaagatattgatgaactg
tttggagaatctgacaataacaaggacggaaagattgattttgatgagtttctgaaaatg
atggagaacgtccagtaa
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