KEGG   Scomber japonicus (chub mackerel): 128357079
Entry
128357079         CDS       T09718                                 
Symbol
tnnc2.1
Name
(RefSeq) troponin C, skeletal muscle
  KO
K12042  troponin C, skeletal muscle
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04020  Calcium signaling pathway
sjo04814  Motor proteins
sjo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    128357079 (tnnc2.1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    128357079 (tnnc2.1)
   04820 Cytoskeleton in muscle cells
    128357079 (tnnc2.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128357079 (tnnc2.1)
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     128357079 (tnnc2.1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_8 EF-hand_FSTL1 EF-hand_9 AIF-1 EH SPARC_Ca_bdg EF-hand_11 EF_EFCAB10_C SPEF2_C EF-hand_STIM1
Other DBs
NCBI-GeneID: 128357079
NCBI-ProteinID: XP_053173293
LinkDB
Position
4:complement(6388862..6394935)
AA seq 165 aa
MVKDEPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREE
LDAIIEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFIDREE
FGDILHLTGEPVVEEDIDELFGESDNNKDGKIDFDEFLKMMENVQ
NT seq 498 nt   +upstreamnt  +downstreamnt
atggttaaagatgagcccactgacgcccaaagcgatgcccgctccttcctgactgaggag
atgattgcagaattcaaggctgctttcgacatgttcgacaccgatggtggcggtgacatc
agcaccaaggagttgggacaggtgatgagaatgctgggccaaaacccgtcaagggaggag
ttggatgccatcattgaggaggtggatgaggatggcagcggtaccattgactttgaggag
ttcttggtcatgatggtgcaacagttaaaggaggaccaggccggaaagagtgaagaagaa
ctttcggaatgcttccgtatttttgacaagaacggagatggtttcatcgaccgggaggag
tttggagacattctccatctcaccggagaaccagtcgtagaagaagatattgatgaactg
tttggagaatctgacaataacaaggacggaaagattgattttgatgagtttctgaaaatg
atggagaacgtccagtaa

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