Scomber japonicus (chub mackerel): 128361610
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Entry
128361610 CDS
T09718
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04370
VEGF signaling pathway
sjo04510
Focal adhesion
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128361610 (kdr)
04370 VEGF signaling pathway
128361610 (kdr)
04020 Calcium signaling pathway
128361610 (kdr)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128361610 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128361610 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128361610 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128361610 (kdr)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128361610 (kdr)
Protein kinases [BR:
sjo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
128361610 (kdr)
CD molecules [BR:
sjo04090
]
Proteins
128361610 (kdr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
V-set
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Ig_PDGFR_d4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128361610
NCBI-ProteinID:
XP_053178107
LinkDB
All DBs
Position
7:complement(10159552..10176320)
Genome browser
AA seq
1350 aa
AA seq
DB search
MMALGVSVIPLLGIILEISCVAATGLRFMPDPPVLNINGIHRMNKSDNLELTCRGRQHLK
WSTPPTSTRFSRSDCSGSGLFCETLQITNATVNETGQYQCYYRDLKVEDGKTAASAYVFV
HDYKVPFVPSDKEYEVVFIREGERVVIPCRGSVENLNVTLHTKYPNKELHPDGKDSVWDA
RTGFTIPSYLISYAGVVSCQTRIGNETFKSSLYIVAVVGYKIYGLELTPKEVKLSVGERL
TLSCTASTELNVGIEFNWTHSGQALTSVNGSRLTHATPHKKKLWASLELSNTLIVENVTI
DHRGEYTCTASSGKMEKSKTAHLTVYEKPFIDLQEPSTKVWELPVGDLTFATMPVKYSAY
PEPTIRWLKNGLPLLKDYYRVKGKNDSLTIRGLVETDAGNYTMVLTNRITREEQRHTIQL
LVNVPPHIIEKEVAPDTDVYPYGSSPILRCTVRGIPIPTNIEWQWMSKEDCPTAFQSGLM
KSEAQLEGCTDWRNITNGTGPNTVERIFTDIDHSQKKIMSSLKIQKAKAQVLYRCTAHNK
VSEDSRVIFFHVTRGLELSVSPSNEPLEEDHVVLRCKADNLIYGNLAWFRVLKSDHIASV
LPCRSLTLQRRPLQQAVLSTVQGTNVTLELPLPNVSRQDEGLYACQVENIKTRERTCLIR
RLSLRGLEAARILNNITDQKVNVSATMTLHCDAAGTPNPTVVWTKNNHTVVEGSGVILSQ
ENRVLMIQRVKKEDGGLYTCTACNSRGCDTSQAFLTTEGAEEKTNVELIVPIGSVVIAMF
FWLLIVFVIRGRKRPNGGDLKTGYLSMILDSEDMPMDEQCERLTYDANKWEFPRDRLKLG
EPLGRGAFGQVVEAAAFGIEKATTCTTVAVKMLKEGATSSEYRALMSELKILIHIGHHLN
VVNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKRKRVDSQKWASGEEDVTE
GDLGLGKIAQLDICTGTAVCSRAGDKASGSSVDTQEESSDQDHLTMEDLICYSFQVAKGM
EFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLPLKWMAPET
IFDRVYTTQSDVWSFGVLLWEIFSLGASPYPGVCIDESFCRRLKEGTRMRPPEYATNEIY
QTMLDCWLDRPTDRPTFAELVEHLGNLLQASAQQDGKDYIPLTPSSETEGPPVSPDSRIP
YNRPQSGELLEAQLHYDNAPSLGVSQQSERCSRPLSVKTFEDIPVEHSSVMEGHTDSGVC
FSPEEVKGLNQLPTTPNFSQLLRCKSKESLASESSNQTSGYQSGYHSDDTDTPIYANEEM
IMKHNMLKKPPLPKTPEKFNVEIRYSTPPV
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctgggagtctccgtcattccacttcttggcattattctggaaatcagttgt
gttgctgccactggattgaggttcatgcctgatccaccagtgctgaacatcaatggaatc
cacaggatgaacaaatctgacaatttggaacttacatgcagaggtcgccagcacctgaaa
tggtcaactcctcctacaagcactcgcttctccaggagcgactgcagtggatcaggactc
ttctgcgaaacactgcagatcaccaacgcaactgtcaatgaaactggacagtatcagtgc
tactacagagacctcaaagttgaagatggcaagactgcagcatctgcatacgtgtttgta
catgattacaaggtgccatttgtgccatctgataaagaatatgaggtggtcttcatccgt
gaaggagagcgggtggtcataccgtgcagaggctcagtggaaaatctcaatgttacgctc
cacactaagtatccaaataaggagcttcatcccgatgggaaggattctgtatgggacgcc
aggacaggtttcactattcccagctatctgatcagctacgccggcgtcgtgtcctgccag
actcgtattgggaatgagacgttcaagtcctctctctacattgtcgctgttgttggatac
aagatctatggtcttgaactgacccccaaagaagtcaagctgtctgtgggggagcgactg
acgctcagctgcactgccagcactgagctcaatgtgggcatcgagtttaactggacgcac
tctggccaggccctgacctcggtaaacggttcaaggctgacccacgcgacaccccataag
aagaagctgtgggcttctctggagctgtccaacacgctcatagtggagaatgtgacgatc
gatcacaggggagaatacacctgcactgcatccagtgggaagatggagaaaagtaagaca
gcgcatcttacagtttatgaaaagcctttcattgatttgcaggagccatccacaaaggtt
tgggagttgccagtgggagatctgacatttgccaccatgcctgtgaagtactcagcctat
cctgagcccaccattagatggttaaaaaatggccttccactcctgaaggattactacaga
gtcaaagggaaaaatgattctctcaccatccgcggacttgtagaaacggatgcaggaaat
tatacaatggtcctgaccaataggatcactagagaggagcagagacataccatacagctg
ctggttaatgttcctcctcatatcattgagaaggaggtggcaccggacactgatgtatac
ccgtatggcagcagccccatcctgaggtgcaccgtccgtggaattcccataccaacaaat
atagagtggcagtggatgtccaaagaggattgtccgacagccttccagtcaggtctgatg
aagtctgaggctcagctagaaggctgtacagattggagaaatatcactaatggcaccggt
ccaaacactgtagaacggattttcacggacatcgatcattcccaaaagaaaattatgagc
tctttgaagattcagaaagccaaggcccaggtcctctacaggtgcacggctcacaacaaa
gtgtcagaggattcacgcgtcatctttttccatgtgacacgtggcctcgagctgagtgtg
tctccatccaatgagcctttggaggaggaccatgtggtcctgcggtgtaaggcggacaac
ctgatctatggcaaccttgcgtggttccgtgtgttgaaatcggatcacatcgcatcagtg
ctgccctgtcgctccttgacactgcagcggaggcccctgcagcaagccgtgctctccact
gtgcagggtactaacgtgaccctggagctgccactgcccaatgtgtcccgccaggatgag
ggtctgtatgcctgtcaggtggaaaacatcaagactagggagagaacctgtctgatacgc
cgtctttctctcagaggtctcgaggctgcgaggatccttaacaatataaccgaccaaaaa
gttaacgtgagtgcaacgatgactctccactgtgatgctgctgggacaccaaacccaacg
gtggtgtggaccaaaaacaaccacactgtggtagagggctcaggtgtgattctgagccaa
gaaaaccgtgttttgatgattcagcgagtgaagaaggaggacggtggtctgtacacctgc
actgcatgtaacagccgtggttgtgacacctcacaggcctttttgactactgaaggtgca
gaagaaaagaccaatgtggagctgattgttcctattgggtcagtggtcatcgccatgttt
ttctggctactgatcgtctttgtcatccgtggaagaaagagaccaaatggtggagatctg
aagacgggctacctgtccatgatcctggactcagaggacatgcccatggacgagcagtgt
gaaaggctcacctatgatgccaataaatgggagttccctcgggacagactaaagctaggt
gaacctctgggacgtggagcgtttggtcaggttgtagaggcggccgccttcggcatcgag
aaagccaccacatgcaccactgttgcggtcaagatgcttaaggagggagccacatcaagt
gagtaccgtgccttgatgtcagagctgaaaatcctcatccatattggacatcatctcaat
gttgttaacctgctgggagcctgtacgaagcctggagggccactgatggtgattgtggag
tactgtaaacatggaaacctctccagctacctaaaaagcaagcgtggagagtacagcccc
tacaagaggaagcgagtggatagccaaaagtgggcatctggcgaggaggatgtgactgaa
ggggatttgggtctggggaaaattgcccagttggacatctgcacaggaacggctgtctgc
tccagagctggagacaaggcttcgggcagcagtgtcgacactcaggaagagagctcagac
caagaccatctgaccatggaggacctgatctgctacagcttccaggtggccaaaggcatg
gagtttctgtcctcccgcaagtgtatccacagggatctagcagccaggaacatcctgctt
tcagagaacaatgtggtgaagatttgcgactttggccttgctagagatgtctacaaagac
cctgactatgtccgcaagggagatgctcgtctgcctctgaagtggatggctcctgagacc
atcttcgaccgggtgtacactacacaaagtgatgtttggtccttcggggtcctcctctgg
gagatcttttctttgggggcttctccctacccgggcgtttgcatcgatgagtctttctgc
aggaggcttaaggaaggcaccaggatgagacctccagagtacgccaccaatgagatatac
cagaccatgttggactgttggctggatcgtcccacagacaggccgacatttgctgaactg
gttgaacatttgggcaacttgctacaagccagtgctcaacaggatgggaaggactacatt
cccctgaccccaagcagtgaaacagaaggacctccagtgagccctgactccaggatcccc
tacaacaggccccagagtggagaactcctagaagctcagcttcactatgacaacgcaccg
tctctcggtgtgtcccaacagagtgaaaggtgcagcaggcccctcagtgtgaagacattt
gaggacatccctgtggagcacagtagtgtcatggagggtcacacagacagtggagtgtgc
ttttcaccagaggaggtgaagggtttgaatcagctgccaactacacccaactttagccag
ctactgcgctgtaagagcaaagagtctctggcctcggaatcgtccaatcagacaagcgga
taccagtcagggtaccactctgatgacacagacactccgatctacgctaacgaggaaatg
atcatgaagcacaacatgctgaagaagcctccgctgcctaagacgcctgaaaagttcaac
gtggagatccgttatagtacgccacctgtctga
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integrated database retrieval system
