Scomber japonicus (chub mackerel): 128362912
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Entry
128362912 CDS
T09718
Name
(RefSeq) polycomb group RING finger protein 3
KO
K11488
polycomb group RING finger protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128362912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128362912
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
128362912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
DUF3337
TRAF3_RING
GAGA
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128362912
NCBI-ProteinID:
XP_053179749
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Position
8:28521506..28599214
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AA seq
249 aa
AA seq
DB search
MAVLGNPDMLTRKIKLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQREFYQKLGMEVPGDIKGEL
CNMKTHLDQRNGDAKSEDTANKEAGEEKPEEDNDYHRSDEQVSICLECNSSKLRGLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggtattagggaaccccgacatgctgacgaggaagataaagctgtgtcacatcaat
gcccacatcacatgtcgtctgtgtgagggctacctgatcgacgccaccaccgtcaccgag
tgcttacacaccttctgtagaagctgcctagtgaagtatctggaggaaaacaacacgtgc
cccacatgtaggattgttattcatcagagtcatccactgcagtacatcggccatgacaga
acaatgcaagacattgtctacaagttggtacccggacttcaagaggcggagataaagaag
cagagggagttctatcagaagttggggatggaggtgcccggagacattaaaggagagctt
tgcaacatgaagactcatctagatcagcgaaatggcgatgcaaaatcagaggacacggcc
aataaagaggcgggagaggagaaaccagaggaggataacgactatcaccgtagcgacgag
caggtcagcatctgcttggagtgcaacagcagcaagcttcggggtctcaagcgcaagtgg
atacgctgttcagcacaagccacagtcctccacctcaagaagttcatcgccaaaaagctt
aacctgacatcatttaatgagctggacattttatgcaacgaggaaatcttgggaaaggac
cacacgttgaaatttgttgttgtgacaagatggagatttaagaaatctcccctcctgctc
cattacagacccaagatggatctgctgtag
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