Scomber japonicus (chub mackerel): 128363014
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Entry
128363014 CDS
T09718
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128363014 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128363014 (etf1a)
03012 Translation factors [BR:
sjo03012
]
128363014 (etf1a)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128363014 (etf1a)
Translation factors [BR:
sjo03012
]
Eukaryotic type
Release factors
128363014 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
128363014
NCBI-ProteinID:
XP_053179872
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All DBs
Position
8:16131572..16140107
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDTMRYILRVHGAESNGAENDEKTLYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagtgcggcggacaggaacgtggagatatggaaaatcaagaagctg
attaaaagtttggaagctgcccgcggtaatggcaccagtatgatctcactgatcatcccc
cccaaggaccagatttccagagtggccaagatgttggctgatgagtttggtactgcttcc
aacatcaaaagcagagtcaacaggctctctgtactcggggccatcacctctgtacagcaa
agactaaaactctataacaaggttccacctaatgggttggttgtgtactgtggcaccatt
gtgacagaggaaggtaaggagaagaaagtcaatatcgactttgagccttttaagccaatc
aacacctccctttacctctgcgacaacaagttccacactgaggcattgacagccctgctc
tccgatgacagtaagttcggctttattgtgatcgacggtagtggggcgctgtttggcaca
ctgcaggggaacaccagggaggtgctgcacaagtttactgtggacctacctaagaagcac
ggcagaggaggacagtctgctctgcgtttcgctcgtcttagaatggagaagagacacaac
tatgtgagaaaagtggctgagacggctgtccagctgtttgtgtccaacgacaaagttaat
gtggcgggaatggtcctggctggttctgccgacttcaagactgagctcagtcagtctgac
atgtttgacccaaggttacaggccaaggttctgaagctggtggatatctcatacggtgga
gaaaatggtttcaatcaggctatcgagctctccgcagaggttctctctaatgtcaagttc
atccaggagaagaagctcatagggcggtactttgatgaaatcagtcaggacacagggaaa
tattgttttggtgtggacgacacactcaaagccctggagatgggagcggtggagatcctc
atagtttatgagaacttagacaccatgcgttacattcttcgtgtgcatggggcagagagc
aacggagcggaaaatgatgagaaaactttgtacttaacgccagagcaggagaaagacaaa
tctcacttcacagacaaggagacggggcaggaacatgagctgattgagagcatgccactg
ctagagtggtttgctaacaactacaagaagtttggagccacgctggagatagtcacagac
aagagccaggaaggatcccagttcgtcaagggctttggaggcatcggaggtatcttgcgg
tacagggtggatttccaaggcatggagtaccaaggagaggacgatgagttctttgatttg
gatgactactag
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