Scomber japonicus (chub mackerel): 128363409
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Entry
128363409 CDS
T09718
Symbol
cdx4
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128363409 (cdx4)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128363409 (cdx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
128363409
NCBI-ProteinID:
XP_053180384
LinkDB
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Position
8:complement(19811623..19814550)
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AA seq
271 aa
AA seq
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MYVGYLLDKESGMYHQGPVRRSSINLPPQNFVSTPQYPDFSGYHHVPNMDTHAQSAGSWG
PTYGAPREDWGAYSLGPPNTIPTPMNNSSPGQVPYCSSEYSHMHPPGSAVLQPPPENVTV
AQLSPDRERRNSFQWMSKTAQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRR
KSELAVNLGLSERQVKIWFQNRRAKERKMIKKKMGQSDGSGGSVHSDPGSVSPLPVPGSL
SPTDIHGSLYPPQGMNTLPSIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctactggataaagaaagcggcatgtatcaccaagggccagtaaga
agatcaagcatcaatctgcctccacagaactttgtttctacgcctcagtaccccgacttt
tctggataccatcatgtgccgaacatggatacgcacgcacaatctgcggggagttgggga
cctacatatggcgctccacgggaggactggggtgcatatagtctgggaccacctaatact
attcctacacccatgaacaactcatctcccggacaagttccttactgctcatctgagtac
agtcatatgcatcctccaggatctgcggtgttacagccgccaccggagaacgttaccgtt
gcacaactttctcctgacagagaaaggcgcaattcattccagtggatgagtaaaacggcg
cagtcgtcttccacaggtaaaacacggacgaaggagaaatacagggtagtgtacacagac
catcagaggctggagctggagaaggagtttcatttcaacagatacatcacaatcaggagg
aaatctgaactggcggtcaacctcggtctgtcggaaagacaggtgaagatctggtttcag
aaccgcagagccaaagagaggaagatgatcaagaagaagatgggtcagtctgacggcagc
gggggttcagtgcacagtgacccgggttcagtgagccctttgccggtgccgggctccctc
agccccacagacatccacggctctctgtaccctccacagggaatgaacaccttgccatct
atcaggaatatacagcaagtgacagtaactcagtga
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