Scomber japonicus (chub mackerel): 128366079
Help
Entry
128366079 CDS
T09718
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128366079 (ascc3)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128366079 (ascc3)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128366079 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
128366079
NCBI-ProteinID:
XP_053182715
LinkDB
All DBs
Position
10:complement(26028077..26194151)
Genome browser
AA seq
2204 aa
AA seq
DB search
MAPPRLTGALRSFSNVSRKEDFTEQLYDLKTKRLKRQERFAREGLTWQKIVHFCSEHQDK
VKQQAANQELKSLLLAAKQIVGTDHGQEAIEHAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAADASCACVGRLVDPLGDSRVEEFIQAQSSRHNPKQGSTFGRNITFSYDCYTLDP
LEDLPRPAVCEDNMKLDFTNFLNSHQSGRKAANEDEASGSGRSLSSADGTILRTEVEKYL
LGGNMISSSPEELCTSLFEMLASHKSADELQNELFELLGPEGLEMISTLLQRREAIVDSL
LAIPPDRAGYQADGRKVSGEVTKPAYGCQVTIQSEQEKQLMKMYRREEKRERKRGKGIDD
FDPSDPILNFDPREMRVQREQALLTARRDPILTRERVYERIRYPNVYDCYAEATKTSAFV
GGANLLLPEGIRRDNTKMYEEVEIPPNEPMPIGFEEKPVYISELDEIGQLVFKGMKRLNR
IQSMVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKVVYVAP
MKALAAEMTNYFSKRLEPLGISVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
SFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSNNKIQQLHDTEEVCYNKVLEQVKAGHQV
MVFVHARNATVKTAMGLIEMAKNHGETCFFQPDQGPDYGHCEKQIQRSRNKQMKEMFPEG
FGIHHAGMLRSDRSLMESMFSKGHLKVLICTATLAWGVNLPAHAVIIKGTQIYDAKRGAL
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDSLADNL
NAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAFQMDPSLELYRKELVVEAG
RKLDKARMIRFEERTGYFGSTDLGRTASHFYIRYNTIETFNEHFNSQRTEADILGIVSKA
EEFDQLKVRDEELDELDQLLSNYCELPAAGGVENGYGKVNILLQTYIGRGEVDSFSLISD
LSFVAQNAARIVRALFEIALRKRWPTMTYRLLTLCKVIDKRLWGFAHPLRQFPTLSHIVL
NRLEAKNLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPAITMEASVQPITRTVLRV
RLVVTPDFRWNDQVHGSVGEPWWLWVEDPANDHIYHSEYFLLQKKQVVTGEPQHIVFTIP
IFEPLPSQYYIKAVSDRWLGAEAVCIINFGNLILPERHPPHTELLDLQPLPVTALGNREY
ESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPTSKVVYI
APLKALVRERIDDWKIRIEEQLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARD
LADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGM
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAE
IAAGTIASKQDAMDYITWTYFFRRLVMNPSYYSLEDVNHESINKYLSNLVERSLRDLECS
YCMEIKEDDWTIDPLTHGRIASYYYLRHQTIRMFKERLRSELPIQELLSILTEAEEYAEL
PVRHNEDQLNSQLAQQLPLQVNPHSYDSAHTKTHLLLQAHFSHAQLPCSDYNTDTKTVLD
NAIRICQAMLDVAASEGWLVTALSICNLVQMIVQGRWLHDSSLLTLPHVEQQDLYLFRKW
TNRKGRGETGGFNGPIEGLPELIAACNGKESVFAAIVGQEFQSSQFSQAWSFLSHLPVLE
VWMSVKGWWEDSQGQTERPLPAAGANLREESSWLDVHADQEYVLQVSLRRINQGQQRRKQ
DSKAQAPRFPKMKDEGWFLVVGEVDRRTLLAVKRVGYVRTHTSVSVAFYTPEKTGKCIYT
LYLMSDSYLGLDQQYDIHLNVKPASIASQVNTEVSDSVSDLSLS
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggctccgccaaggctcactggtgccctccgctccttctccaatgtcagcaggaaagaa
gacttcactgaacagctgtatgatctgaagaccaaacgtctgaagagacaggagcgcttt
gccagagagggcctgacgtggcagaagatcgtccatttctgcagcgagcatcaggacaaa
gtgaagcagcaagctgccaatcaggagctgaagagcctccttctagcagccaaacagatt
gtggggacagatcatggtcaggaggccattgaacatgctgctgtcttcctttttgagacc
ttccataacaaagaccatgtgggcacagaggagacccgggccattaagcagatgtttgga
ccctttccttcatctgcagctgacgcctcctgtgcctgcgtgggccggctggtggatcca
ctcggagactccagagtcgaggagttcatccaagcccagagctcccgtcacaaccccaaa
caaggctccactttcgggcgcaacatcaccttctcctatgactgctacactctggaccct
ctggaggatctgccccgccccgctgtctgtgaagataacatgaagctggacttcaccaac
ttcctcaacagccatcagagtgggaggaaagctgccaatgaggacgaggcgtccggctca
ggaagatctctgagctctgcagatggaaccattctgagaacagaggtggagaagtatctg
ctgggaggcaacatgatctcatccagcccagaggagctgtgcacctccctgtttgaaatg
ctggcctctcacaagagtgcagacgaactgcagaacgagctgtttgaactgctgggccca
gaggggctggagatgatctccaccctcctccagcgaagagaggccattgtcgactccctc
ctcgccatcccacctgacagggctggctaccaagcagatgggcgaaaagtcagcggagaa
gtgaccaagcccgcctacggctgccaggtgaccatccagtcagagcaggagaaacagctg
atgaagatgtaccgcagagaggagaaaagggagaggaagagagggaagggaattgatgac
tttgacccctccgatccgatcctcaactttgaccccagagagatgagagtccagcgggag
caggccctcctgaccgcacgccgtgatcctatactgacccgagaaagagtgtatgagcgg
attcgatatcccaatgtctacgactgctacgccgaggccaccaagacctctgcttttgtc
ggaggagccaatttgctgctgcccgagggaatccgtagagacaacactaagatgtatgaa
gaggtggagatcccgcccaatgaacccatgcctatcggctttgaagagaagcccgtctac
atctctgaactagatgagatcggtcagctggtgttcaaggggatgaagcgtctgaacagg
atccagtccatggtgtttgagacggcctacaacaccaatgaaaaccttctgatctgcgcc
ccaactggcgctggaaagaccaacatcgccatgctgactgtccttcacgagatccgccag
cacctgcagcctgggggggtcatcaagaaggatgaattcaaggtagtatatgtggctcct
atgaaagctttggcagctgagatgactaattacttcagtaagcgtttggagccactgggc
atcagtgttaaagaactcaccggggacatgcaactaaccaaaggagagatcctacgaaca
cagatgttggtgaccactccagagaagtgggatgttgtaaccaggaagagcgttggagac
gtcgctctctcccagatcgtacgcctcctgatattggatgaagttcaccttcttcatgaa
gatcgaggaccagtactggagagtctggtagccaggaccatcagacaggtggagtccacc
cagagtatgatcaggatcctgggactgtcagccactctgcccaactacctggatgtagcc
tccttcctacacgtcaacccgtacatcggcctcttcttcttcgacagtcgcttcagaccg
gtgcccctcggacagacctttgttggcatcaaatccaacaacaagatccagcagcttcat
gacacggaggaagtttgttacaataaagttctggagcaggtcaaagctggtcatcaggtg
atggtgtttgtccacgcccgtaatgccacagtgaagacagccatgggactgattgagatg
gccaagaaccacggagaaacatgcttcttccaaccagaccagggcccagactacggtcac
tgtgaaaaacagatccagcgctccagaaacaaacagatgaaagagatgttccctgaaggt
tttggaatccaccatgctggcatgctgcgatctgaccgcagccttatggagagcatgttc
tccaaagggcacctgaaggtgttgatctgcactgccaccctggcctggggagtgaacctg
ccagcccatgctgttatcatcaagggcacacagatctatgatgccaagcgcggtgccctg
gtggatctgggtatcctggacgtcatgcagatctttggacgtgcaggtcgtccccagttt
gacaagtacggtgagggcaccatcatcaccacccacgacaagctgagtcattacctgacc
ctgctcacccaacagaaccccattgagagtcagttcctggacagcctggcagataacctc
aacgctgagatcgccctgggcacagtcaccaacgtggaggaggcagtgaagtggctcagt
tatacttacctctacgttcgcatgagggccaacccactggcatatggcattaaccacaag
gctttccagatggatccctccttagagctgtacaggaaggagctggtggtggaggcaggc
aggaagttggacaaggccaggatgatccgcttcgaggagcgcactggctactttggatcc
actgacctgggcaggactgccagccacttctacatcagatacaacactatagagactttc
aatgaacatttcaactctcaacggacagaagcagacatcctcggtattgtgtccaaagcc
gaggagtttgaccagctcaaggtacgtgatgaggagttggatgaactggatcagttgctg
agtaactactgtgagctgccggctgcaggcggagtggagaacggctacggcaaggtcaac
atcctgctgcagacctacatcggacgaggagaggtggacagcttctctctcatctcggac
ctgtcttttgtagcacagaacgcagctaggatcgtcagggctctgttcgagatcgctctg
aggaagcgttggccgaccatgacgtaccgactgcttacgctctgtaaggtgattgacaag
cggctgtggggtttcgcccaccctcttcgccagttccccaccctgagccacatcgtcctg
aaccgtttggaagccaagaacctcactgtggacaaactcaaggaaatgaggaaggatgag
attggtcatatgctgcaccatgtgaacatcgggctgacagtcaaacagtgtgtccaccag
atccccgccatcacaatggaggccagcgttcagccaatcacacgcactgtcctgcgcgtc
cgtctcgtggtcacgcctgacttccgctggaatgatcaggtccacgggtcagtgggtgag
ccatggtggttatgggtggaggatccagccaatgatcacatctaccattctgagtacttc
ctcctgcagaagaaacaggtggtaacaggagagccccagcacattgtgttcaccatcccc
atctttgaaccgctgccctcccagtactacatcaaggctgtttctgatcgctggctcggg
gccgaggccgtgtgcatcatcaacttcgggaacctcatcttacctgagagacacccccca
cacaccgagctgctggacctgcagccgctgccagtgacagctctgggtaaccgggagtat
gagagcctgtacaagttcactcacttcaaccccatccagacgcagatcttccacacgctg
tatcacaccgacaccaacgtcctgctgggggcgccaacaggctctggaaagaccatcgca
gcagagatggccatgttccgagtcttcaacaagtatcccacctctaaggtggtgtacatc
gctccgctgaaggctctggtcagagaaaggattgacgactggaagatcaggattgaggag
caactgggaaggaaagtggtggaactgacaggtgatgtgactcctgatatgagagctata
gcgcaggctgacctcattgtcaccacaccagagaaatgggacggagtgagcagaagctgg
cagaacaggagctacgttcagaaagtagccatcctcattatcgatgagatccacctgctg
ggggaggacagaggtcctgtattagaagtcattgtgtccaggaccaacttcatctcctcc
cacacttctaagacagttcgagtggtgggactgtccaccgctctggccaacgctcgagac
ctggctgactggctgggcatcggacaggtgggtttgtttaacttccgtccttctgttcgc
cccgtcccattggaggttcacatccacggtttcccagggcaacactactgcccccgcatg
gccaccatgaacaagcccaccttccaagcgatacgcagccactctccagccaagccggtg
ctgatctttgtgtcatcgcggcgtcagactcgactgaccgctctggatctcatagcttac
ctggccacagaggacaaccccaaacagtggctgcatcaggatgagagagagatagaagcg
atcatcgccacagtgagggactccaacctgaagctgacgctggcctttggtatcggcatg
catcacgccggcctgcacgagagagaccgcaagactgtggaggagctgtttgtcaactgc
aagatccaggttttgattgccaccagtactctggcctggggggtgaacttccccgctcac
ctggtggtagtcaagggaaccgaatactatgatggaaaatccaggcgctacgtggactac
cccatcacagatgttctgcagatgatggggcgagcgggtcgacctcagtttgacgaccag
ggcaaagcggtcatcctcgtccacgacatcaagaaggatttctacaagaagttcctctac
gagcctttccccgttgagtccagcctcctcagtgtgctgtcagaccatctgaatgctgag
attgctgcaggaaccatcgcctccaagcaagatgcaatggactacatcacctggacttac
ttcttcagacggctggtgatgaaccccagttattacagcctagaagacgtcaaccatgag
tccatcaataagtacctgtccaacctggtagagagaagcctgcgggacctggagtgctct
tactgcatggaaataaaagaggacgattggaccatcgatccactgactcacggccgcatc
gcctcatattactacctgagacaccagaccatccgcatgtttaaagagcgactgaggtct
gagctgcccatccaagagctgctctccatcctcactgaagcagaggaatacgcagagttg
cccgtcagacacaatgaagaccagctgaacagccagctggctcagcagctccccctgcag
gtcaacccacactcctatgacagtgcccacaccaagacccacctgctgctgcaggcccac
ttcagccatgcccagctgccatgcagtgactacaacaccgatacaaagacggtcctggac
aacgccatccgaatctgtcaggccatgttggatgtagcagccagtgagggctggctcgtc
acagctctcagtatctgcaacctggtgcagatgattgtacagggccgctggctgcatgac
tcctcattactgacactgccacatgtagagcagcaggacctctatctgttcaggaaatgg
acaaacaggaaaggaaggggcgagactggaggcttcaacgggccaatcgaaggacttcct
gagctgattgctgcctgcaatggaaaggaaagcgtttttgctgctatagtcggccaagag
tttcaatcaagtcagttttcccaggcgtggtccttcctgagtcatctcccagtgctggag
gtctggatgagtgtgaagggctggtgggaggacagccaggggcagacggagcgccccctg
cctgcagcgggagccaatctaagggaggagagcagttggctggacgtccatgctgaccaa
gagtacgtcctgcaggtgtcgctgagacgcatcaaccagggccagcagaggaggaagcag
gacagtaaggcccaggctcccaggttccctaagatgaaagatgaaggctggttcctggtg
gtaggagaggtggatcgcaggacgctgctggcagtcaaacgtgtgggatacgtgcgcacc
cacacatctgtgtctgtggccttttacacaccagagaagactggaaagtgtatctacact
ctctacctgatgagtgacagctacctgggtctggaccagcagtatgacatccacctcaat
gttaaacctgccagcatcgcctcccaggtcaacacagaagtgtctgattcagtgtctgac
ttgtccctcagctga
DBGET
integrated database retrieval system
