Scomber japonicus (chub mackerel): 128366659
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Entry
128366659 CDS
T09718
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128366659 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128366659 (phf1)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366659 (phf1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128366659 (phf1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128366659 (phf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
DUF4537
Motif
Other DBs
NCBI-GeneID:
128366659
NCBI-ProteinID:
XP_053183380
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All DBs
Position
10:complement(2483326..2501442)
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AA seq
561 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
LCCICDAPPLKEPLINCLKCRHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCSKGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPTNITHRRSPLSLPCQRRVGGPEPRKSKRRIIETQACPPPVS
ANPIELLPCCHGYMGGASLYTSRKSEEELNLSSPPKRMYALYHTTYNGNTALSRSLHHYN
SVEDTCRVPPPCFQYPLNANGSHHHHHLHQHHHSHQHNHNHQNHHNHQNHHNHQNHHNHQ
NQHQPGQKQLEPLLPYQVGMGGGGGIGGGGGGGGGGGGVGGGDGTVARSWGGGEAVRILA
RRVTPDGKVQYLVEWENVSLY
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgagggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactcagagttctgggtcctaagaaaggacattcactcattcgctgctggagtggaagaa
ctttgctgtatttgtgacgctccgcctcttaaagaacccctcataaattgtcttaaatgt
cgccacggttatcatccagagtgccacacgccaaccatcgaaccggaagctgacagcgat
tcgtggatatgtcggcaatgtgtctttgcagtcgcaaccaagagaggcggggcactcaaa
cgaggacgttttgcccggctcatgcagtttatgaaactccggctcccctatcagctgtct
tctttagactgggacccgcagcacctgaccaatcagcaacagtgttactgctactgtgcc
ggacctggagaatggaacctgaagatgttacagtgtggaagttgtggccagtggttccac
gaggcctgcacgcagtgtctaaccaagccattactgtacggggacaggttttatcaattc
cagtgctctgtatgttcaaaaggaccagagaccatccaaagactacccatgacctgggtg
gatttggctcatttagtgctctaccatctctccctgtgctgcaagaggaaatactttgat
tttgaccatgaaatcctgtctttcaccaatgagaattgggactcgttgctcctaggcgcg
ctctctgacacgccaaggcaagaccgctgtcacaatctcctcaacgctctgaactcccac
aaggacaggtttgtctctggaaaagagatcaagaagaagaagtgtctttttgggcttcag
gtccgagcccctccaccgctgacgtccgattcttcgcccctcatcacggacccacctacc
aacatcacgcaccggagaagcccgctgtcactaccctgccagaggagagtgggggggcca
gagccacgtaaatcaaagcgtcgtatcattgagacacaggcttgtccacccccagtgtct
gccaaccccattgagttactgccatgttgccatggctacatgggaggggccagcctttac
acctccaggaagtcagaggaggagcttaacttgagctctccccctaagcggatgtatgcc
ctctatcacaccacttacaacggaaacactgcgctctccaggagtctccatcactacaac
agtgtggaggacacctgcagggtaccaccaccctgcttccagtaccctctaaacgccaac
ggcagccatcaccaccaccacctccaccagcatcaccacagccaccaacacaaccacaac
caccaaaaccaccataaccaccaaaaccaccacaaccatcaaaaccaccacaaccatcaa
aaccaacaccagccggggcagaagcagctggagcccctcctaccttaccaggtcggcatg
ggcggagggggtggcataggtggaggaggaggaggaggaggaggtggaggtggagtcgga
gggggagacgggacagtggccaggagctggggaggaggggaagcggtgagaatcttggcg
agacgcgtcacgccagacgggaaggtgcagtaccttgtggagtgggagaacgtgagtttg
tactga
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