Scomber japonicus (chub mackerel): 128368209
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Entry
128368209 CDS
T09718
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
128368209
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128368209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128368209
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128368209
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Claudin_2
Motif
Other DBs
NCBI-GeneID:
128368209
NCBI-ProteinID:
XP_053184961
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Position
11:15788318..15796176
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AA seq
454 aa
AA seq
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MNTLFFIFHLIILAGAAWASTDETRLVKTLFTGYNKVVRPVSHFKDPVVVTVGLQLIQLI
NVDEVNQIVSSNVRLKQQWKDVNLQWNPEDYGGIRKIRIPSTDIWRPDLVLYNNADGDFA
IVHETKVLLEYTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNPD
SDRPDLSNFMESGEWVMKDFRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVIIP
CMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPDWVRKVFIETIPNIMFFSTMKRPGKEKPNKSI
QNTDFDISDISGNQVTHITYQSPIAKNPDVRSAIEGVKYIAETMKSDEESNNAAEEWKFV
AMVLDHILLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatactttatttttcattttccatctaataattctagcaggagctgcctgggcctcc
actgatgaaacacgcctggttaaaaccctcttcactggttataataaggtcgttcgtcct
gtcagccactttaaggacccagttgttgtgactgttggtcttcagctcatccagctgatc
aatgtggatgaggtcaaccagattgtcagcagcaacgtgcgactgaagcagcaatggaaa
gatgtgaacttgcagtggaacccagaggattatgggggcatcagaaagatcagaattccc
tccactgacatttggcggcctgatctagtcctctacaacaatgctgatggtgactttgcc
atcgttcatgagaccaaagtgctgctggaatatacaggaatgatcacgtggaacccacct
gccatcttcaagagctactgtgaaattattgtgctacatttcccctttgacctccagaac
tgcagtatgaagctgggcacctggacttatgatggcaacttggtcgttgtcaatcctgat
agtgatcgtcctgatctgagtaacttcatggagagtggagagtgggtgatgaaggatttc
cgcagctggaaacactgggtgtactatgcctgctgcccggacaccccctacctggacatc
acctaccacttcctcatgctgcgtttgcccctctactttatcgttaacgttattatcccc
tgtatgctcttctccttcctgactggacttgtcttctatcttcctacagactctggtgaa
aagatgactctcagtatctccgtcttgctgtctctgactgtgttcctgctggtcattgta
gagctgattccctccacctccagtgctgtgccactcattgggaagtacatgctcttcacc
atggtctttgtcattgcctccatcatcattactgtcattgtcatcaacactcaccaccgc
tccccgagcactcacacgatgcctgactgggtccgtaaggtttttattgaaactatcccc
aacatcatgttcttctcaacaatgaagcgcccaggaaaggaaaagccaaataaaagtatc
cagaataccgattttgacatctcagacatctctggcaaccaggtcactcatattacctac
cagtcacccatcgccaaaaatcctgatgtccgcagtgccattgagggagtcaagtacatt
gcagaaaccatgaaatccgatgaagaatccaacaatgcggctgaagagtggaagtttgtg
gccatggtgttggatcacatcctgctgtgtgtcttcatggctgtgtgtcttatcggcaca
ttaggtgtgttcgcaggccgtctcattgagctaagcatgctctag
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