KEGG   Scomber japonicus (chub mackerel): 128376953
Entry
128376953         CDS       T09718                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128376953 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sjo03041]
    128376953 (crnkl1)
   03036 Chromosome and associated proteins [BR:sjo03036]
    128376953 (crnkl1)
Spliceosome [BR:sjo03041]
 Complex B
  Other components
   Prp19-related factors
    128376953 (crnkl1)
 Complex C
    128376953 (crnkl1)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     128376953 (crnkl1)
SSDB
Motif
Pfam: HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT TPR_14 Suf TPR_19 TPR_CcmH_CycH Mad3_BUB1_I U3_assoc_6
Other DBs
NCBI-GeneID: 128376953
NCBI-ProteinID: XP_053192788
LinkDB
Position
17:6901697..6908613
AA seq 773 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKGRTIYERFVIVHPEVKNWIKYARFEEKHGYIAHGRKVYERA
VEFFGEEHVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANMP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYAQF
EIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEYTPENCTT
WIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRNLYKRL
LQRTQHVKVWISYAKFELSIEGPERLQKCRQIFEEANKGMRSCEEKEERLMLLESWRDFE
IEFGSETTRERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQVEIEDTNEDMAEDTGENSPEKGQMPEDKTTSPSGSPSRSDEASTTPPADQAEN
GNDKNLAMETEPQKTYDDRDDDGSSSSSSGSDSDDDDGEKKEKQSKGSDEEKD
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggcgtcgacggcggcgggtaagcagcggataccgaaggtggcgaaggtgaaaaataaa
gctccggcagaggttcagatcactgctgagcagctgctcagagaagccaaagaaagggag
ctcgaacttctgccaccacccccgaaacagaagatcactgatgaggaagagctgaacgat
tacaaactgaggaagaggaaggggtttgaggacaacatcagaaagaatcggactgttatc
agtaactggattaaatacgcacaatgggaggaaagcctgaaggagatccagagggctcgc
tccatttacgagcgagcgctggacgtcgaccaccgcaacatcacgctgtggctgaagtac
gccgagatggagatgaagagccgacaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcctgcctcgagtcaaccagttctggtataagtacacctacatggaggagatg
ttggggaacgtggccggctgcaggcaggtgtttgagcgctggatggagtgggagcccgag
gagcaggcctggcactcctacatcaactttgagctgcgctacaaggaagtggacaaagga
cgcacaatctatgagcgattcgtcatcgtccaccctgaggtgaagaactggatcaaatat
gctcgttttgaggagaagcacggctacatcgctcacggcaggaaggtgtacgagagggcg
gtggagttcttcggggaggagcatgtggatgaaaacctctttgtggctttcgccaggttt
gaagagactcagaaagagtttgaacgggttcgggtgatctataaatacgctttggaccga
atccctaaacaccaggcgcaggagctcttcaagaactacaccatgttcgagaagaagttt
ggagaccggcgaggcattgaggacgtcatcgtcagcaaacgacggttccagtatgaggag
gaagtcaaggcaaacccacacaactacgacgcctggttcgattatctccgcctggtggag
agcgacgccgaccccgacacggttagagaggtttacgagagagccatcgccaacatgccc
cccatccaggagaagagacactggagacgatacatctacctgtggatcaactacgctctg
tatgaagagctggaggtcaaggatcctgagagaacgaggcaggtgtatcaggcctgtctg
gatctgatccctcacaaaaagttcacttttgctaagatctggctgctctacgctcagttt
gagatccgacagaaaaacctgcagggagccagaaaagtcatgggcacggcgatcgggaaa
tgtccgaagaacaaactgctgaagggttacatcgagctggagctgcagctgcgtgagttt
gaccgctgcaggaaactgtacgagaaatacctggaatacactccggagaactgcaccacc
tggatcaagttcgcagagctggagaccatcctgggagacgtggagagatccagagccatc
ttcgaactcgccatcggacagccgagactggacatgcccgaggtgctgtggaagtcctac
atcgactttgagatcgagcaggaagagtttgacaacacgaggaatctgtacaagaggctg
ctgcagcgcacccagcatgtcaaggtttggatcagctacgctaagttcgagctgtcgatc
gaaggcccagagcggctgcagaagtgccggcagatcttcgaggaggccaacaagggcatg
aggagctgcgaagagaaggaggagcgactcatgctgctcgaatcctggagggacttcgag
atcgagtttggctcggagaccaccagagagagagtgagaaagctgctgcccgagaaggtg
aagaagaggagaaagctgacggccgaggacgggtcggacgcaggctgggaggaatattac
gactacatcttccccgaggacgccgccaaccagcccaacctcaaactgctggccatggcc
aagatgtggaagaggcagcaggtggagatcgaggacacgaacgaggacatggccgaagac
acgggcgagaacagtccagaaaaaggtcaaatgcctgaagacaagacgacgtcgccctct
ggttctccctctcgctccgacgaagcctcgacgactccacccgctgaccaggcggagaac
ggcaacgacaaaaacctggcgatggaaacagaaccgcagaagacgtacgacgaccgagac
gacgatggtagcagcagcagcagtagtgggagtgacagtgatgatgatgatggagagaaa
aaagagaaacagagcaagggcagcgatgaagagaaagattag

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