Scomber japonicus (chub mackerel): 128376953
Help
Entry
128376953 CDS
T09718
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128376953 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128376953 (crnkl1)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128376953 (crnkl1)
Spliceosome [BR:
sjo03041
]
Complex B
Other components
Prp19-related factors
128376953 (crnkl1)
Complex C
128376953 (crnkl1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128376953 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
128376953
NCBI-ProteinID:
XP_053192788
LinkDB
All DBs
Position
17:6901697..6908613
Genome browser
AA seq
773 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKGRTIYERFVIVHPEVKNWIKYARFEEKHGYIAHGRKVYERA
VEFFGEEHVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANMP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYAQF
EIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEYTPENCTT
WIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRNLYKRL
LQRTQHVKVWISYAKFELSIEGPERLQKCRQIFEEANKGMRSCEEKEERLMLLESWRDFE
IEFGSETTRERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQVEIEDTNEDMAEDTGENSPEKGQMPEDKTTSPSGSPSRSDEASTTPPADQAEN
GNDKNLAMETEPQKTYDDRDDDGSSSSSSGSDSDDDDGEKKEKQSKGSDEEKD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacggcggcgggtaagcagcggataccgaaggtggcgaaggtgaaaaataaa
gctccggcagaggttcagatcactgctgagcagctgctcagagaagccaaagaaagggag
ctcgaacttctgccaccacccccgaaacagaagatcactgatgaggaagagctgaacgat
tacaaactgaggaagaggaaggggtttgaggacaacatcagaaagaatcggactgttatc
agtaactggattaaatacgcacaatgggaggaaagcctgaaggagatccagagggctcgc
tccatttacgagcgagcgctggacgtcgaccaccgcaacatcacgctgtggctgaagtac
gccgagatggagatgaagagccgacaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcctgcctcgagtcaaccagttctggtataagtacacctacatggaggagatg
ttggggaacgtggccggctgcaggcaggtgtttgagcgctggatggagtgggagcccgag
gagcaggcctggcactcctacatcaactttgagctgcgctacaaggaagtggacaaagga
cgcacaatctatgagcgattcgtcatcgtccaccctgaggtgaagaactggatcaaatat
gctcgttttgaggagaagcacggctacatcgctcacggcaggaaggtgtacgagagggcg
gtggagttcttcggggaggagcatgtggatgaaaacctctttgtggctttcgccaggttt
gaagagactcagaaagagtttgaacgggttcgggtgatctataaatacgctttggaccga
atccctaaacaccaggcgcaggagctcttcaagaactacaccatgttcgagaagaagttt
ggagaccggcgaggcattgaggacgtcatcgtcagcaaacgacggttccagtatgaggag
gaagtcaaggcaaacccacacaactacgacgcctggttcgattatctccgcctggtggag
agcgacgccgaccccgacacggttagagaggtttacgagagagccatcgccaacatgccc
cccatccaggagaagagacactggagacgatacatctacctgtggatcaactacgctctg
tatgaagagctggaggtcaaggatcctgagagaacgaggcaggtgtatcaggcctgtctg
gatctgatccctcacaaaaagttcacttttgctaagatctggctgctctacgctcagttt
gagatccgacagaaaaacctgcagggagccagaaaagtcatgggcacggcgatcgggaaa
tgtccgaagaacaaactgctgaagggttacatcgagctggagctgcagctgcgtgagttt
gaccgctgcaggaaactgtacgagaaatacctggaatacactccggagaactgcaccacc
tggatcaagttcgcagagctggagaccatcctgggagacgtggagagatccagagccatc
ttcgaactcgccatcggacagccgagactggacatgcccgaggtgctgtggaagtcctac
atcgactttgagatcgagcaggaagagtttgacaacacgaggaatctgtacaagaggctg
ctgcagcgcacccagcatgtcaaggtttggatcagctacgctaagttcgagctgtcgatc
gaaggcccagagcggctgcagaagtgccggcagatcttcgaggaggccaacaagggcatg
aggagctgcgaagagaaggaggagcgactcatgctgctcgaatcctggagggacttcgag
atcgagtttggctcggagaccaccagagagagagtgagaaagctgctgcccgagaaggtg
aagaagaggagaaagctgacggccgaggacgggtcggacgcaggctgggaggaatattac
gactacatcttccccgaggacgccgccaaccagcccaacctcaaactgctggccatggcc
aagatgtggaagaggcagcaggtggagatcgaggacacgaacgaggacatggccgaagac
acgggcgagaacagtccagaaaaaggtcaaatgcctgaagacaagacgacgtcgccctct
ggttctccctctcgctccgacgaagcctcgacgactccacccgctgaccaggcggagaac
ggcaacgacaaaaacctggcgatggaaacagaaccgcagaagacgtacgacgaccgagac
gacgatggtagcagcagcagcagtagtgggagtgacagtgatgatgatgatggagagaaa
aaagagaaacagagcaagggcagcgatgaagagaaagattag
DBGET
integrated database retrieval system