Scomber japonicus (chub mackerel): 128378200
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Entry
128378200 CDS
T09718
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128378200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378200
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Others
GGA
128378200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
Hrs_helical
ImmE5
PCRF
NRIP1_repr_1
Motif
Other DBs
NCBI-GeneID:
128378200
NCBI-ProteinID:
XP_053193618
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All DBs
Position
18:complement(9965550..9973711)
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AA seq
667 aa
AA seq
DB search
MAAPPDTESLESRINRATNPLNKDTDWSSIHGFCDQLNNDLEGPQLATRLLAHKIQSPQE
WEAMQALLVLETCMKTCGKRFHSEVGKFRFLNELIKVVSPKYLGARSPEPVKKKVLELIY
SWTLGLPDEAKISDAYQMLKKQGIIKQDPELPPDKLLNLPPPRPKNAIFEDEEKSKMLSR
LLNSSHPEDLKAANKLIKEMVQEDQKRAEKVSKRVNAIQEVKESVTLLTQLLQDYDSTAS
DQSNAELIQDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDSLTHVINLYKQQVKGE
IVNGNNTLNAQKQTGGTALLDLTGLDTSPQSPPSFPEFPTPTDSLNAPSQETGISLLDDE
LMSLGLSEGTHTSNPPSQPEDSTAWDSFQSSDSIDADIPAAPSLLLSPDPPSHSQTLSSG
STPGNSALDELDLLGKTLLQQSLPPEGLQVKWDKQQSKPTLRDLQSKASSNITPNPIPVF
TNEPAPLLNSQPSLGPTLLDMSPTHTETLPPPPPPPAAATPEVTLTDVFVPLESIKPSSL
LPVTVFDGHSLRVLFHFARDSPPSRPDVLVVIISMLSSAPVPVTNIDFQTTAPKSMAVKL
QPPSGTELPAFNPILPPAAVTQILLLANPNKEKVQLQYRLTFTMGEQDHSESGSLEQFPP
PETWGNL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgcccgatacggagagcttggagtctcgtatcaacagagccacaaacccg
ctgaacaaagatacagactggagcagcatccacggcttttgtgaccagctcaacaatgat
ctggagggacctcagctggccaccaggctcctggcccacaagatccagtctccacaggag
tgggaggccatgcaggctctgttggttctggagacatgtatgaaaacctgcgggaagcgg
tttcacagtgaagtgggaaagttccgctttctcaatgaactcatcaaagtagtttctcca
aagtacctgggtgcacggtcgccagagccggtaaagaagaaggtgttggagttgatttat
agctggactttggggctgccggatgaagccaagatctcagatgcgtatcagatgctgaag
aaacaaggtattattaaacaagacccagagctaccacctgacaaactactgaaccttcct
ccaccaagacccaagaatgccatttttgaggatgaggagaagtcaaaaatgctgtctcgc
ctgttgaacagctcgcaccctgaggacttgaaagcagccaacaaactcattaaggaaatg
gtccaagaggatcagaaacgagcggagaaggtgtcaaagcgggtaaacgccatccaggaa
gtgaaggagagcgtcaccctgctgactcagctcctgcaggactacgacagcacggccagc
gaccagagcaacgccgagctcatacaggatctgtaccagcgctgtgagaaaatgagacct
acgctgttcagactggcgagtgatacagaggataacgacgaggctctggcggaaatcctg
caggccaacgacagcctgactcacgtcatcaacctgtacaaacagcaggtgaaaggggag
attgtaaatggcaacaacacattaaacgcacagaaacaaacaggaggcacggcgctgctc
gatctgacaggattggacacgtcaccccagtcgcccccctccttcccagagttccccacc
ccgacagacagcctcaacgccccctcgcaggagacggggatcagtctcctcgacgacgag
ctcatgtcactcggtttaagtgaaggaacacacacctccaatcccccctcccaacctgag
gactccacagcctgggactccttccagtcctctgacagcatagatgcagacatcccagca
gcacccagtctcctcctgagtcccgacccaccctcccactcgcagaccctgtcgtctggc
tccacccctgggaactctgccctagacgagcttgacctactgggaaagacgctgctccag
cagtctctgcctccagagggcctgcaagtcaaatgggacaagcagcagtccaaaccaact
ctgagagatctccagagcaaggccagctccaacattaccccaaaccccatcccagtcttc
accaatgaacctgcgcctctcctcaactctcagcccagccttggacctacgttgctggac
atgtccccgactcacacagagactcttcctcctcctcctcctcctcctgctgctgctact
cctgaagtcactctgactgatgtttttgtaccgctagaatccattaagcccagtagtttg
ttacctgtgactgtattcgacggacacagtctgcgggttctcttccacttcgctcgtgac
tcgcctccgtctcgtcccgatgtgctggtggtgatcatctccatgctgtcctccgcccct
gtccccgtcaccaacatcgacttccaaaccacagctccaaagtctatggcagtgaagctg
cagcctccatcaggaacagagctcccagctttcaaccccatccttccccctgctgccgtc
acacagatcctgctacttgcaaacccaaacaaggaaaaagtgcagctgcagtacagatta
accttcactatgggcgagcaggaccacagtgagagcggcagtctagaacagtttcctcct
ccggagacgtggggtaacctatag
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