Scomber japonicus (chub mackerel): 128378545
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Entry
128378545 CDS
T09718
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128378545 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378545 (gga3b)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Others
GGA
128378545 (gga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
Ferritin
CRA
DASH_Dad4
Anticodon_2
DUF6675
Motif
Other DBs
NCBI-GeneID:
128378545
NCBI-ProteinID:
XP_053194085
LinkDB
All DBs
Position
18:complement(14787586..14794278)
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AA seq
706 aa
AA seq
DB search
MTSRDVVSAMAYQEGESLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQIAVTLLV
HKIHSPQEWEALQALTVLEACMKNCGRRFHNEVGKYRFLNELIKVVSPKYMGDSAPEKVK
MKIVEMLYSWTVAFPSEAKISEAYQTLRRQGLVTCDPELPLDRTLIPSPPTRPKHPVFDN
EDMGKLLAELLRSKNPEDLQEANRLIKNMVKEDEARVQKVTKRINTLEEVTINVKLLSEM
LSHYNKDSSSDSDKEILKELYERCDKLRRAAFKMATEAEDNDTSLGDILQANDDLSKVIN
SYKKIVEGLPINGDSEEPQSTTESDTTDTLIDLAGLDTPSPPQPAAPPALCSNPISTSLT
ASPIPVLPPPPKLLVGSHGSQGSSPSHPPLDQASTALSLLDDELLSLGLNDPPTSLSSQS
KPKLNEVSNQWTSMQAPASNVDIFGSVACPAPVVPPAEPAIAIHSLQNLQDLAMMGFSDP
KSLSRQMPMGSSFGMPAAAPPLVPGQGSPSSASLLQGTMTSSPALSQAKAQSLGSAPGSP
LFRSLSPCHPPLQGSPARTTDISLSNVHVPLEAIRPSKVLPVTAYDKDGVRVLLNFASDC
PPGRPDVLVMVVSMLNTAPLSVHNVVLQAAVPKSMKVKLQTPSGTELAPFNPLLPPASIT
QIMLLANPLKEKVRLRYKLAFTLGVRPCNEVGEVDQFPSSETWGHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacgcgatgttgttagtgctatggcgtaccaggaaggggagtcgcttgaatca
tggctcaataaagccacccatccgacaaacagacaggaggactgggagtacatcataggc
ttctgtgatcagatcaacaaggaactggagggtcctcagatagccgtcacactgctagtc
cacaaaatccactcaccacaagaatgggaagcacttcaggctctgacagtattggaggca
tgtatgaagaactgcgggagaaggtttcataatgaggtcggaaagtacagatttttgaac
gagctgatcaaagttgtgtctccaaagtacatgggcgacagtgcgcctgagaaggtgaag
atgaagattgtagaaatgctgtacagctggactgtcgctttccccagtgaggccaagatc
agtgaagcctaccagacactgagaagacaagggcttgtaacatgtgacccagagttaccg
ctggacaggactctgatcccctctcctccgacacgacccaaacatcctgtgtttgacaac
gaggacatgggcaagctgcttgctgagcttctccggagcaaaaatccagaagacctccag
gaagccaataggttgatcaaaaacatggtgaaagaggatgaggcacgtgtgcagaaggtt
acgaagcgtataaacacactggaggaggtaaccatcaatgtcaagttgctgagtgagatg
ctctcccattacaataaagacagctcctctgactcagacaaggagatccttaaggaactc
tatgagcggtgtgacaagctgaggcgcgctgctttcaagatggccactgaggccgaggac
aatgacaccagtttaggtgacatcttgcaggccaatgatgacctctccaaggtcatcaac
tcctataagaagattgttgaggggctgccgatcaatggtgacagtgaagagcctcaatcc
acaactgagagcgacaccacagacacactgatcgacctcgctggcctcgacacaccgagc
cctcctcaacctgccgcccctcccgcactgtgctcaaatcccatttccacaagtctcacg
gcttcccccatccctgtcctgcctcctccacctaaactcttggtgggctcccacggcagt
cagggcagcagcccgagtcaccctcccctcgaccaggcctccactgcgctctctctcctt
gatgatgagctgctgtctctaggactgaatgacccccctacctctctgagcagccaatca
aaacccaagttgaacgaagtgtccaatcagtggacctccatgcaggccccggcatcaaat
gtggatatatttgggagtgtagcttgtccagctccagtggtccccccagctgaaccagcc
atcgccatacacagtctccaaaacctacaagaccttgctatgatgggcttttcagatcca
aagagtttgtcccgtcagatgccgatgggaagcagctttgggatgcctgcagcagcacct
ccccttgtgcctgggcagggctctccctcttcagcctctcttctccagggcacaatgacc
agctcccctgctctgtcccaagccaaggctcagagcctgggttcagccccaggcagccca
ctgttccgctctctgtccccctgccaccctcccctccagggcagcccggccagaacaaca
gacatctctctgagcaatgtgcatgtccctctggaggccatcagaccgagtaaagtgtta
cctgtgacagcctacgataaggacggtgtcagagtgctgctcaactttgcgtctgactgt
ccccctggcaggcctgacgtgttggtcatggtggtgtccatgctcaacacagcaccactc
tctgttcacaatgtggtactgcaagctgctgtgcccaagtccatgaaggtgaagctgcag
actccatcaggaacagaactggcaccatttaaccccctcctacctccagcctccattacc
cagatcatgttgctggctaatccattaaaggagaaggtgcgcctacgctacaagctggct
ttcacattaggagttcgcccatgcaacgaggtcggagaggttgaccagttcccctcatca
gagacgtggggtcatctatag
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