Scomber japonicus (chub mackerel): 128380527 Help Entry 128380527         CDS       T09718                                  Symbol nup188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     128380527 (nup188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sjo03019]     128380527 (nup188) Messenger RNA biogenesis [BR:sjo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      128380527 (nup188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup192 Nup188_SH3-like Motif Other DBs NCBI-GeneID:  128380527 NCBI-ProteinID:  XP_053196354 LinkDB All DBs Position 19:complement(21639158..21659562) Genome browser AA seq 1746 aa AA seqDB search MAESEMSVRSCRELWTILLGRSALREPAQIEAELDRHWDRLHQGLSYYKSPSSSSAGKVK ENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQSQTLL LKIADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSNYQSQFEKLFK AEAPTWETHGNLMTERQVSRWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTKIFKEQ GFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFSSAADV VKEMDQLLVTFGDIPHHGPVLLSWVLLRHTLRPDESSPVVRRIGNTALQLGVFKYLSTML KGLGVSGNNCTASTAKMCIYGLLSFVIISFEEESLQADGVATQCSHLIDAACEVLSAPSL AEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKMSFYTQ VYKHKPNDIIAKDDETLWRRQTPKLLYPLGSGQTNLWMPQGVLGQVMIGGEQGYVVRWDY SYSSWTLFTCEVEMLLHVVSTADVIAHCVRVKPILDLVHKIISTDWTVSDCLLPLTSRIY MLLQRLTSVINPPVDVIASCVNCLSVLATRMPGKVWSSLHHTGFLPFASNPLTSMAQCVS AEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLVTTLVKGQLGSTQNKGLIPCVLLVLKEM LPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLANTEAGQ AVVNIMGVGVDTIDMVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSDVVSPL EQALTQHGGHGSNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAI RDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFLLGEWS CLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKDRFWENLTTPL FGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDSLQKFSNARRYEYWSQ YVKSLVCHVAEMEEEGICYFAETQMLISAWRMLLILSTSHSDVMQLSEDSTKLKLFMDVL DGTKAALTTPMSVPCLRLGSMMATLLLILLKQWRSVVATAPDILSPLSLILESVLQADQQ MMERTKAKIFSALISVLQIQGLNGGETSQLPQLLLSVCETVKDEALALIDNTRHMSQTGD AGEEEDSMETDSPRGPQKDKRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVLPSVLS AVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEGSSNGAS QSFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFVNEALDFVGVHQERILQCLNAVRTV QSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDIQVNLCYLCQTCTYLLHSKKMLHH YLQAKNGEALPPGPLPRTQRPPQTPSKEAPGGGEREEAEQKALLAVQCSLLKILSKTLAT LQHFTPDCCQILLDQCMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVALSMLSEM EKKKEPVSLSIASLASSEELQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRDKQRLK QELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQSKPPTPGSKGSHEGQEPFIQLVQAF VRLVQR NT seq 5241 nt NT seq  +upstreamnt  +downstreamnt atggcggaatcagagatgagcgtcaggagctgtcgagaattatggaccatattgctggga agatcggcattgcgagagccggctcagatagaagcagaactcgacagacactgggacaga ctacatcaaggactcagttactacaagtcacccagctcctcctctgcggggaaagtgaag gagaacaaagatgtcgcacaaccattaaaggattttggtctgaggatcagtaaactgctg ggtcttgatgaacagcagagcgtgcagcttttacagtgttacctacaggaggactacaga ggaacccgtgattcattaaaggttgttctcaaagatgagcgacaaagccagacgctgctg ttgaagattgccgactattactatgaagagcgcatgtgtctgctcagatgtgtcctccta ttgctgacatactttcaagatgagcgacatccctacagggctgaatactctaactgtgtg aataaactggagaaggacctggtcagcaactaccagtcacagtttgagaagctctttaaa gcagaagcaccaacatgggaaacccacggaaacctcatgacggagaggcaggtgtctcgg tggttcctgcagtgtctgagagaacagtctctgctgctcgagatcatcttcctgtattac gcctactttgagatgagcccgtccgacctgctcagcttcaccaaaattttcaaagagcag ggcttcggtctgcggcagaccaacagacacctggtagacaagagcatggatgcactggtt gaccggatagggtacttgagctctctcatcctggtcgagggaatggacatagacttcctg cacaagtgtgccttggaggactgtacagagcagcatcagttctccagcgctgctgatgtt gttaaggagatggatcagctgctggtgacgttcggtgacatccctcatcacgggccggtg ctgctgtcctgggtgctgctgagacacacactgagaccagacgagtctagccctgtggtc aggaggataggcaacaccgctctgcagctgggggtgttcaagtacctttctaccatgctg aaaggactcggagtctctggaaataattgtacagcgagcacagcaaagatgtgtatctac ggccttctttcatttgtcatcatttcttttgaagaggaaagcttacaggctgacggtgtg gcgacgcagtgctcccatctgattgatgctgcctgtgaggtcctctctgctcccagtctg gctgaagtcttttgggaaatgaaacccaacatgggattgggaatgatcctggacagtgca gtcgggatgttccctcataagatcggaccactgttacagcttctaactgcacttctgtca aacaagtcgactgttaaaaaggtgtacaactttttggataagatgtccttctacacacaa gtttacaaacataaacccaatgatatcatcgccaaggatgatgagacactatggaggaga cagacgccaaaactgctctacccgctcggctcggggcagactaacctgtggatgcctcaa ggagtgcttggccaggtgatgattggaggcgagcagggctacgtggtgcgctgggattac tcctacagctcctggacgctgttcacctgtgaggtggagatgctgctccatgttgtttca actgcagacgtcatcgctcattgtgtccgtgtgaagccgatcctggatctggtgcacaag atcataagcacagactggaccgtgtcagattgtctgttgcctctcacttcacgcatatac atgctgctgcagaggttaacatctgtcatcaaccctccagtggatgtgatcgcctcttgt gtgaactgcctctctgtcctggccacaaggatgccagggaaggtgtggtccagtctgcac cacacaggtttcctccccttcgcctccaaccctttgaccagcatggctcagtgtgtgagt gccgaagggatgaaagcaggtaactatggcaacctgctagtccagattgagcagcccagg ggagagtatgctgtgaccatcgccttcctccgtctcgtcactaccctggttaagggccag ctcggcagcactcagaacaaaggcctgatcccctgtgtactgctcgtgttgaaggagatg ctgcccacataccacaagtggcgttacaacacatacggtgtcagggagaggataggttgt cttattttggagctgatccacgccattcttaatctgagcccagagggagaggatcagggc agcactcccaccctgcagtctctgtgcatctacagcctggcaaacaccgaggccggacag gcagtcgtcaatatcatgggagtcggagtggacaccatagacatggtcctggcagcacag cccagcagctgcggctctgagggtcccggtcagatcctgatccagacagtcaaactggcc ttctccgtcacaaacaacgtcatccgcctaaagccgccgtccgacgtcgtgtccccgctg gagcaggcgctgactcagcacggcggtcacggcagcaacctcatagtcgtcctggccaaa tacatttaccacaaacacgacccggcgctgcctcgactcgcaatccagctgctcaaaagg ctcgccacagtggctcccatgtccgtctacgcctgcctcggcagcgacgcggcagccatt cgggacgccttcctcactcggctacagagcaagaccgaagacatgaggatcaaggtcatg atccttgaatttctaaccgttgccgtggaaactcagcctggcctcattgaacttttcctc aacttagaagtcaaagacggcagcgaggggtcaaaggagtttctgctcggggagtggagc tgccttcatgtggtcttggacctgatcgactccaaacagcaggggaagtactggtgtccc cccctgctccaccgagcagccctggccttcctcctcgcgctctggcaggatcgcagggac agcgccatctctgtcctacgcaccaaagacaggttttgggaaaatttgacaacacctctc tttggaacgctcaccccaccgtcagacaccacagagccttgtgtcttggaaacttgcgct tttgtcatgaaaatcatcggcctggagatctactatgttgtcagcggttccttggagcag tctctgaaggacagtctgcagaagttctccaacgcgcggcggtatgagtactggtcccag tatgtcaaatctctggtttgccatgtggcggagatggaggaggaaggaatctgttacttc gcagagacccagatgttgatctctgcctggcggatgctgctgatactctcaactagtcac tcagatgtgatgcagctctcagaggactcgaccaagctgaagcttttcatggacgtgctg gatggaactaaagctgctctcactacacccatgtctgtgccttgccttcgccttggatcc atgatggccactctactactcatcctcctcaaacagtggagaagcgtggtagcgacagct cctgacatcctgtccccgctctctctgatcctggagtctgtcctacaagctgaccagcag atgatggagaggaccaaagccaaaatcttctctgctctcatttctgtgttacagattcag ggactcaacggtggggagacttcccagctgccccagctgttgctgtccgtgtgcgagacg gtgaaagacgaggctctggcgctcatagataatactcgtcatatgagccagacgggagat gctggggaggaagaggacagcatggagacagactctccccgcggccctcagaaggacaaa agagacggggtgtgtgtgctggcgctgcacttggcgaaggagctgtgtcgcaccgatgag gacggcgagcactgggtctcagtgatgaggaaggttcctgtcctcccctcggtgctcagc gcagtggagctcagcctgcgctccaaacacaacctctacttcactgaggctgcgcttcac ctgctgctcacactggcccgcactcctcagggggcagcagctgtagctggagcaggagtc atccagacaatctgcctccctctgctgagcgtgtatgagggctcctcaaacggtgcatca cagagtttctcccgtaagtcccaggactccgcctgctggccgggtgtgtaccgtctctgc atgtctctaatggagagtctgctcaagactctgcgctacaacttcgtcaacgaggccctg gactttgtcggggtgcatcaagaacgtatactacagtgtctgaacgcagtgcgaaccgtg cagagtctggcgtgtttggacgaggcggaccacacagtcggcttcctgctgcagctgtcc agtttctgtaaagagtggcagtttcaccttcccaaactgctccgagacattcaggtgaat ctgtgttacctgtgtcagacctgcacatatctgctccacagcaagaagatgctacatcac tacctccaggctaaaaacggtgaggcgttgccccctggtcccctccctaggacacagcgc cccccacagaccccatctaaagaggcaccaggtggaggggagagagaggaggccgagcag aaggccctgctggccgtacagtgcagccttctgaagatccttagcaaaacgctggcgacc ctgcagcacttcactccagactgctgccagatactcctggaccagtgtatggacctcgct gagtatcggaccctgttcgtgctcagcttcacgactccagcgttcgaccccgatgtggct ccttcattcgggaccctactagccaccatcaacgtggccctgagcatgctgagcgagatg gaaaagaagaaagagcccgtctccttgagcatcgcctcacttgcttcatcagaggagctc caagcgctgaagtcattgctgatgttcaccatggagaactgtttctacgtgctgatctct caggcggttcggtgtctcaaagatccctccatcctccctcgagacaaacagaggctcaaa caggagctcagctctgaactgagcactcttctctccagcctatcccgtcacttccgccgg ggctcgccgtcgtctccggccagcggcatcctcccctccacccagtccaaaccccccacg ccgggctccaagggaagccacgaaggtcaggagccgttcatccagctggttcaggcattc gtcagactcgttcagagataa

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