Scomber japonicus (chub mackerel): 128382644
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Entry
128382644 CDS
T09718
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128382644 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128382644 (arfgef1)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128382644 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
128382644
NCBI-ProteinID:
XP_053198615
LinkDB
All DBs
Position
21:complement(13107907..13158334)
Genome browser
AA seq
1951 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQHTEPDSPQLQTHIHPPAKGTTQEANGPVTPPTPSTNIPSTPSTPSTPAP
EGGSRSVSGEQEEQGEQGQQGSVYESPDPENGSGFCVAENEQTEADQATAAQNAAAQQHP
EAGDEEEEEETPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESGAESEQAES
EPAEAVTEGTQCSMEDEGTLGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSNDTQES
GAAPGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSI
LQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQI
EVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLV
NDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQE
KPSEQESTETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIE
QGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVM
YAYVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADT
AYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIA
MKETKELTMKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHV
RPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALAR
FTLLTASSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVK
ARYISGTVRSKEGFLTSTKEQSNDEYLGLAGGTVDRKQIASIQESIGETSSQSVVVAVDR
IFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRI
WEVIGDHFNKVGCNTNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKN
RSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTN
VFEKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSD
DMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDL
FRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNDVLLDDILAQLYW
CVQQDNEQLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTWRPAGA
EGEPMTTQSLPDKQLDSISQKSVDIQSRSEDQHSISSADRVSMESRRQSQYSSAPGMYED
GSRSRTPTKVQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDALY
AADVPVETQDQGMYRYLTSEQLFKLLDCLLESHCFAKAFNSNNEQRTLLWKAGFKGKSKP
NLLKQETSSLACGLRILFRMYTDESRQDAWEEVQRRLLNVCSEAVAYFLALTSESHREAW
TNLLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFHIA
QLPGPEPDPQPAHVEQETDTEVGEEAGEEAQ
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttcctgacacgagctttggagaagattttg
gccgacaaggaggtgaaaaaggctcaccattcacaattgcgcaaagcctgcgaggtggca
ctagaggaaatcaaagaggaatcagaaaaattaagtccacccagtggagacggcaaatcg
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagctgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcatcgtcatcacctcactc
gactgtttacagaagctgatagcgtatggtcacttgacgggcagtgccccggacagcacg
gccccaggcaagaagctcatcgacaggatcatcgagaccatctgcgcttgcttccagggc
ccacagactgatgagggcgtgcaactacagattatcaaggctctgttgacagcagtgacc
tcccagcacatagaaatccatgagggcactgtcctgcaggccgtccgcacgtgctacaac
atctacctggctagcaagaatctcatcaaccaaaccacagcgaaggccaccctaacacag
atgctcaacgtcatctttgcacgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagttgcaggaagcaaagcagctggagaga
gagcggcaccggcagcactcgccagtcacccagcacactgagcctgactccccccagcta
cagactcacatccacccaccagccaagggtacgacccaggaagccaacgggcccgtcact
ccgccaactccaagcaccaacatcccatccaccccgtcaaccccctccacgccggccccg
gagggcggcagcaggtctgtgtctggggagcaggaggagcagggagagcagggacagcag
gggtcggtctacgagagccctgatccagaaaacggttctggcttttgtgtggcagagaat
gaacagactgaggcagaccaagccacagcagctcagaatgcagctgcccaacagcatcca
gaggcaggtgatgaggaggaagaggaagaaaccccaaactatgaggagaaggcccaggaa
attgtccagagtatcctacaggaagtggtcaacactgttgcaggagggcactgcctggac
cctgcaaacctctgctcggacactaaggagtctggtgctgagagcgagcaggcagagtcg
gagccagctgaagcagtgacagagggcacccagtgctccatggaggatgagggcaccctg
ggcagcgacagtgagcacgtccatgccaacggtatccccggcacgcctatttccgccagc
ttcaccccttcgctgcctgatgacaggctgtctgtctcgtccaatgacactcaggaatca
ggagcagcaccgggccaaccacctggtgctaaattctcccacatcctccagaaagatgcc
ttccttgtctttcgctcactctgcaagctgtcgatgaagccgctgtcagacggaccacct
gatcccaagtcccacgagctgcgatcgaaggtcttgtccctccagctgctgctgtccata
ctgcagaacgccgggcccatcttcaagaccaatgagatgttcatcaacgccatcaaacag
tacctgtgtgtggccctgtctaagaatggtgtctcatctgtgcctgaggtcttcgaactg
tccctatccattttcctcacgctgctctcccacttcaagacgcacctcaagatgcaaatt
gaggtgttcttcaaggagattttcttgtacatccttgaaacttccacaagctcctacgac
cacaagtggatggtcatacaaaccctcactagaatatgtgcagatgcccagagtgtggtg
gacatctatgtgaactacgattgtgacttgaatgctgctaacatatttgagcgattggtc
aacgacctctcgaagattgcgcaagggcgcgggggccacgagctcggcacaacacccctg
caggagctgaccctgagaaagaaaggccttgaatgtctagtgtccatcctgaaatgtatg
gtagagtggagtaaggatcaatatgtcaaccccaactcccagaccagcctcggtcaggag
aaaccgtcagagcaagagagcacagagacaaaggccccggagaccataaaccgctatggg
agcattaactccctggactccacagcctcctctggcatcggcagctatagcactcagatg
tcagggactgataatcccgaacagtttgaggttctcaaacagcaaaaagagataatcgag
caagggattgacctgttcaacaagaaaccaaagagaggaatccagtatcttcaagagcaa
ggcatgctgggtaccaccccagaagaccttgctcagttcttgcaccaagaagagaggctt
gattcgactcaagtgggagaattcctcggggataatgatcgtttcaataaagaggtgatg
tacgcctacgtagatcaaatggacttccagggcaaagactttgtttctgcactgaggatg
ttcctggaaggcttccggctccctggagaggcccagaagatcgaccggctcatggagaaa
tttgcagcaagatatcttgaatgcaatcaagggcaaactctctttgccagcgctgacacg
gcatacgtccttgcctactcaatcatcatgttgacaacggaccttcacagtccacaggtg
aagaataaaatgacaaaagagcaatacatcaagatgaaccgcggcatcaacgacagcaaa
gacttacctgaggagtatctctcggccatctacgacgagattgcgggcaaaaagattgcc
atgaaggagacaaaagagctcaccatgaaatccaacaagcagagtgtggccagtgagaag
cagaggcgtctgctgtacaacgtggagatggagcagatggcaaagacagccaaagcgctg
atggaggctgtcagccacgttcaggcgccattcaccagcgccacacatctggagcacgtc
aggcccatgttcaagctggcatggacacccttcctggctgcttttagcgtgggtcttcag
gactgtgacgacactgaggtggcttcactgtgtcttgaagggatccgttgtgctatcagg
atagcgtgcatcttctccatacagttggagagagatgcgtatgtgcaagccctggccagg
ttcaccctgctgacggccagctctggcatctcagagatgaagcagaagaatatcgacacc
atcaagacgctcatcactgtggctcacactgacggcaactacctgggaaactcctggcac
gagatcatgaagtgcatcagtcagctggagctggctcagctaatcggtacaggggtgaag
gcacgctatatctcagggacagtgcggagcaaagaaggctttttaacaagtaccaaggag
caaagcaacgacgagtacctgggtctagctggagggacagtagacagaaagcagattgcc
agcatccaggagtccatcggagagaccagctctcagagtgtggtggtggctgtggacagg
atattcacaggctctaccagactggatggcaatgcaatagttgattttgtgcgctggctg
tgtgctgtgtccatggatgagctggcctcgcccacacacccacgtatgttcagcctgcag
aaaatagtcgagatctcctactacaacatgggccgcatcaggctgcagtggtccaggatc
tgggaagttattggagaccacttcaacaaggtcggctgtaacaccaatgaagatgtggcc
attttcgcagtcgactctctcaggcaactgtccatgaaatttttggaaaagggggagctg
gccaactttagattccagaaagactttctgaggccgtttgagcacatcatgaaaaagaac
agatctcccaccattagagacatggtggtacgctgcatagcccagatggttaactcccag
gctgcaaacatccgctcaggctggaagaacatcttctctgtcttccacctggctgcatct
gaccaggatgagagcattgtggagctggcctttcagaccacaggccacatcgtcacgaat
gtatttgaaaagcactttgcggccaccatcgactccttccaggacgccgttaagtgtctg
tcggagttcgcctgtaatgcctccttcccagacaccagcatggaagccatccgcctcatt
agacactgcgccaaatacgtctcagagaggccacaggctttcaaagactacaccagtgat
gacatgaatgtagcgcccgaggaccgggtgtgggtgagggggtggttccccattctcttc
gagctctcctgcatcatcaacaggtgtaaattggatgtcaggaccagggggctgacagtg
atgtttgaagtgatgaagacctacgggcacacctttgagaagcactggtggcaagacctg
ttcagaattgtcttcaggatctttgataacatgaagctgcccgagcaacaaactgagaaa
gcagagtggatgaccaccacctgcaaccatgcactttatgccatctgtgatgtcttcact
caatactttgagtccctcaatgacgtcctgctggatgacatcctggctcagctgtactgg
tgtgtgcagcaagataacgagcagcttgcccgttcaggcaccaactgtctggagaacgtg
gtcatcctgaacggagagaagttttccccggagacctgggacaagacatgtaactgcatg
ctggacattttcaaaaccaccatcccccacgcgctgttaacatggagaccagcaggagca
gagggagaacccatgaccacacagagtctaccagacaaacagctggactccatttcccag
aagtcagtggacatacagtctcgctctgaggaccagcattccatcagtagcgctgatagg
gtttccatggagagccgccggcagagtcagtacagttcagcgccaggcatgtatgaggac
ggatccaggagcaggaccccaacaaaggtccaggagcagcgcttattctcagctttgctg
ataaagtgtgtggtgcagctggagctgatccagactattgataacatcgtcttttttcct
gctaccagtaagaaggaagatgctgagaactttgcagcagctcagcgagacgctctgtat
gcagcggacgtccccgtggagactcaggaccagggcatgtatcgctacctgacctctgag
cagctcttcaaactactagactgcctactggagtcgcactgctttgccaaggctttcaac
tccaacaatgagcagaggactttactgtggaaagcaggtttcaaaggaaagtcgaagccc
aacctgttgaagcaggagaccagcagcctggcgtgcggcctgcgtatcctgtttcgcatg
tacacagacgaaagccgccaggacgcctgggaggaagtccagagacgactgctcaatgtg
tgcagtgaggctgtagcgtacttcttggctttgacctcagagagccacagagaggcctgg
accaatctgctgctccttttcctcaccaaggtgctaaagatcagtgatgaaaggtttaag
gcccatgcgtccagatactaccctctactgtgcgagatcatgcagttcgacctgatccct
gagctccgggctgtcctacgaaagttttacctgcgtatcggcctcgtgtttcacatcgcg
cagctgcctgggcccgagccggaccctcagccggcgcacgtcgagcaggaaacagacacg
gaggtgggagaggaggccggggaggaggcccagtga
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