KEGG   Scomber japonicus (chub mackerel): 128384337
Entry
128384337         CDS       T09718                                 
Symbol
kdm6ba
Name
(RefSeq) lysine-specific demethylase 6B isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sjo03036]
    128384337 (kdm6ba)
Enzymes [BR:sjo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     128384337 (kdm6ba)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128384337 (kdm6ba)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 128384337
NCBI-ProteinID: XP_053199866
LinkDB
Position
22:9271934..9366134
AA seq 2221 aa
MHHAVEQFGGRGTRDSFPLDGLNRGPWAPVGGRAWQTPARCSPGMNQHQLLPHLPPGPMG
GLNHPSKFFSNGPMRGGEKLELPQPMLPGLQREQQRPPHHHLHHPPPHRAWEQLGQLYES
HLPPQGHSVVPLPNEHSLRLHNGGYAGSGGPPPNPHLPPSRPNQLLKFGGPQEQLAPRGP
QLLGDEMWAQVHQQRGFPVKMQGSQLKRPGPPLGEHSVIQHTPLPSLHPSSRPAVEDSPS
PSKRKKSSDQVSHPGQQRFSGPGQSLLSQHQSPVHHLPPKPAFWNPLHKDNTPWQPQTAD
RKNPPSLEFQVRTETHKQGMGSYTQKSSPVSSTPSTLSPPPNSSPGSYNHGCATQLQKDT
FQPQAVNQQSPHSSYPSPSSKLGLAPPCQAMEPRGLHNQRGPLIGGQGGSQATSHTASTP
TRDHHLHAQSSPANPPASSNNKINSSRVPYSHFQPHPGLGHQGPPPPPPPPPASNTSVPQ
QSGPHEAWRYQRPSSHSLDSGIYRPPGLLPQRQQSHNQVVDSQVPVSSQHHPHISPTLPP
TNSTRTPVITPNLPMSQSSCSIGGYNSSSSNSGGVTVAGISRANTSPPAGCSVNNISSNN
SWQRGREPAPERSTSTITRPISQLDTLLQPGRGQAANQPHLKGLPRPQQHGPTKSQPTKG
KTYCAQAELAQTPAFSSSSASSSSSSLFSSGRQRAGDSVITSRISNPLPRSPPAYYQAPH
SSVNSIPQRSNPALSSRLGQPDSVPTQAYSRQQIRPPAPTSVPQSIEEALDKLDAELEGH
MQAEERRKRDREEEERRMREEVRRRKEWEMRQKQEEERKRKELEKKKEEEERKKRELERQ
EEERKKRQEEERRRKEAERQEEERKRREWEKKERERKKREWERQEEEGKKREAERQEQER
KKRELERQEKEKKKQKELERKEEEKRRMERKREEELCSAKGKEQTAIENLERLLSGNTSS
TPPPPPLSSVTAPPSGAPPSSSQASPPFPWLSRGGVLPCPPGQAPSTTTLERLRPPPLTP
QTEYAREKQRQREMWSNNGGTTFSPSSTHNTSGMNQPVYPNKPPAMQAAPNQSKDSARER
DSSQLSLPTLALREPPKLYQAFPRENLPPPPLSTTSTGGILQKRVTGSGLENASSCGTDS
DSAQFEEEPSEMSTLLPDGLANIMAMLDESIKKEEEMFNNEKTGSTGLLDNFSPSGQPIK
NYLCAPDLIPALKHQPNQEDFGSNPHASPPVLSRQGSLASPCSRTSSLNEEDEDYFKPSA
NVPLNPKQSMDVGIGIGNTNTNYRHSDLAKLYGLPEQTKSEADEDDDEEDSETPSCSPPP
QRPHLHQTGVNSMFKSLATVLGSQKYAYRGGPFGRPPPSALVGVKYSSSLSLGPDICRQQ
QGSSPTSDSTNPPFSPAVPPSKSSPPLLEDKKLKLEDADVWRDDGLTEERFKKESIPPIK
PIKVIKEEQRLTTISESSLAELGKSCEVMLSRHSLPNKSSDKSDVHVKAEDRHKPEKVKE
HREKDRNRDREREKEKKRKHGHSHSSSRKHEDRKEKKKHREKREEMAFSSSSSSSSTHSS
SSHKRHKDGKSHKEKKDRRILGDLNLQRKEGSDKSLSHYDTDKKKRADASGASSTSEGEH
AEWTSRNSGERSSEHKKGAESGSSLGSTDFLKLKALSDGPPKELKIRLIKVESGDRETFI
ASEVEEKRIPLEEISIKNSASEIIRSCKGARVKGKFRESYLLPAFSVKPIINPEELIPRE
KLNPPTPSIYLESKRDAFSPVLLQFCTDPKNPVTVIRGLAGSLRLNLGLFSTKSLVEANA
EQAVEVRTQVQQPADENWDPSGTGQTWPCESSRSHTTIAKYAQYQASSFQESLQEEKGSD
EEDDEDDEKKPSNSSDTPSKDSTKESSSGEQKPVGKIIKFGTNIDLSDPKRWKPQLQELQ
KLPAFMRVASSGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDC
EWFSVHENYWQAINDFCEKHGVDYLTGSWWPVLEDLYRANIPVYRFIQRPGDLVWINAGT
VHWVQAVGWCNNIAWNVGPLNAYQYQLALERFEWNEVKKVKSIVPMIHVSWNVARTVKIT
DPETYKLLKHCLLQSMKHIQVLRDQLVATGKKISYQSRVKDEPAYYCNECDVEVFNLLFV
TSENNSRKTYVVHCEDCARHRNPNMNNVVVLEQYSIEELMNTYDSFNLVSFPIMPSVSFL
T
NT seq 6666 nt   +upstreamnt  +downstreamnt
atgcatcacgcagtagagcagtttggcgggcgtggcacacgggattccttccctttggat
ggactcaatcggggaccatgggctcccgtgggcggccgcgcctggcagacacctgccagg
tgttcgcctggaatgaaccaacaccagctccttccccatctacctcctggtcctatgggc
ggactgaaccatcccagtaaattctttagtaatgggcccatgcgaggaggtgaaaagctt
gagctcccacaaccaatgttacctggtctgcagagggagcaacagagacctcctcatcat
caccttcatcatccacctccgcacagagcctgggagcaactaggtcagctgtatgaatcc
caccttcctcctcaaggacattctgttgtgcccctgcccaatgagcactcactccgtctc
cataatggaggctatgcaggcagtggtgggcctccccccaacccacatcttccccccagt
cggccaaaccaactgctgaagttcgggggtcctcaggagcagcttgctcccagggggcca
caattgctgggagatgagatgtgggctcaggtgcaccagcagaggggctttcctgtgaag
atgcaagggagtcaactgaagagaccaggccctccactgggggagcactctgtcatccag
cacactcctctgccatccctgcacccatcctcccgcccagctgtagaggactctcccagc
cccagcaagaggaaaaagagctcagatcaggtatcccatcctgggcagcagcgtttctcc
ggccctggccaatctttgttatcacagcatcagtcaccagtccaccacctccctccgaaa
ccggccttctggaacccccttcacaaagacaacactccctggcagccacagacggctgac
cgcaagaacccaccatcactggagttccaggtccgaacagaaacccacaaacaaggaatg
ggcagctacacccaaaagtcctcgcctgtctcttccactccttcaacactctctcctcca
ccaaattcctctcctggtagctacaaccatggatgtgctacacagctacagaaagatacg
ttccaacctcaggctgtaaaccagcagtccccacactcctcctaccccagtcccagctct
aaactggggctggctccaccctgccaggccatggagcctcgtggtcttcacaaccagaga
ggccctctcatcgggggtcaaggtggcagccaagctacctctcatacggcatctacccca
accagagatcatcacctacatgcccaatcgtcaccagcaaaccctcctgcatccagcaac
aacaagatcaacagcagtcgtgtgccttacagccacttccagcctcatccagggctgggg
caccagggtccccctcctcctccaccacctcctcctgccagcaacacctcagtacctcag
caaagtgggccccatgaggcctggagataccagaggcccagcagtcactccctggattcg
ggcatctacaggcctccaggactgctacctcaacgccagcagagccacaatcaggtcgtg
gatagtcaggttcctgtttcctcccagcatcaccctcacatcagccctactctaccccca
accaactccacccgcacccctgtaattaccccgaatctcccgatgtcccagtcatcctgc
tccattggcggctataacagcagcagcagcaactctggtggtgtaactgtggctggtatc
tccagggcgaacacatcaccccccgctggttgctctgtgaacaacatcagcagtaataac
agttggcagagaggaagagagccagcacctgaaagatccaccagcaccatcactaggccc
atctctcagctggacaccctgctgcagcctgggagaggccaagctgccaaccagccccac
ctaaagggactgcctagaccacaacagcatggacccaccaagtcccagcccacgaagggg
aagacttactgtgctcaggctgaactggcgcaaactcctgcattttcctcctcctccgcc
tcatcgtcatcatcatctttgttctcctcagggcgccagagggcaggagacagtgtaatt
acaagcagaatttcaaatcctcttcctaggtctccacctgcatattaccaagctcctcat
tccagtgtgaactctatccctcagcgatccaatccagccctttcctccagactaggtcag
ccagactctgtcccgactcaggcttactctcggcaacagattcgtccaccagccccaacc
tctgtcccccagtccatcgaagaggctctagacaaactcgatgcagagctagagggacac
atgcaagctgaagaaagaaggaaaagggacagagaggaggaagagagaagaatgagagaa
gaggtgaggcggaggaaagaatgggagatgagacagaagcaggaggaggagaggaagagg
aaagagttggaaaagaagaaggaggaggaggagagaaaaaaaagagaattggagagacag
gaggaggagagaaagaagaggcaagaagaggagaggaggaggaaagaagccgagagacag
gaggaggagaggaaaagaagagaatgggagaaaaaggagcgggaaaggaagaagagagaa
tgggagaggcaagaggaggaggggaagaagagggaagcagagaggcaggagcaggagagg
aagaagagagaactggagaggcaggagaaagaaaagaaaaagcaaaaagaattggagagg
aaagaggaggagaagaggaggatggagcggaagagagaggaggaactgtgcagtgcaaaa
ggcaaagagcagactgctattgagaatctggagagactgctctctggcaacacttcctca
acacccccacctccacccctctcttctgttactgcacctccttctggtgcacctccctcc
agctcccaggcttcgcccccattcccctggctaagccgtggcggtgttctcccctgtccc
ccaggccaggcgcccagcaccactactctagaaagactgcgcccaccccctctgacacct
cagactgagtatgccagagaaaagcagaggcagagagagatgtggagcaacaatggcgga
acgacattcagtccctcatcaacacataatacctcagggatgaaccagccggtatacccc
aacaagcccccggcaatgcaagccgcacccaaccaatccaaagactcagccagggagaga
gacagcagccagctctctctccccaccttggcacttagagagccccccaaactgtatcag
gcttttcccagagaaaacctgccgccaccacctttatcaaccacctccacaggggggatc
ctccagaagagggtgacaggaagcgggttggaaaatgccagcagctgtggcactgactct
gacagtgctcagtttgaggaggagccctctgagatgtctacactactccctgatggtctg
gctaacattatggcgatgctggatgaatctatcaaaaaggaagaggagatgtttaacaat
gaaaagactgggtccacaggtcttcttgacaacttttctcctagtggccaacctatcaag
aattacctgtgtgccccagacctcatcccagcactgaagcatcagccgaaccaggaagac
tttgggtccaatccccacgctagccctcctgtgcttagccgccaaggctctctagcatcc
ccttgcagccggacgtcttctctcaatgaagaggatgaagactactttaaaccctctgca
aatgtccccttgaaccctaaacagtcaatggatgtgggaattggaatagggaatacgaat
accaactatcgccacagtgacctggctaaactttatggcctccccgagcagactaaaagt
gaggctgacgaggatgacgatgaagaggattctgagaccccatcttgttctccaccaccc
caaagaccccacttgcaccaaacaggtgttaacagcatgttcaagtctctagcaacagtt
ctagggagccagaagtatgcataccgtggtgggccttttgggagaccccctccgtcagct
ttggtcggggtcaaatattcctcttcactgtcactgggccccgatatctgccgccagcag
caaggcagctctccaacgtcagattcaaccaatccaccattcagtccagctgttccccct
tcaaagtcctcccctcctctgctggaagacaagaaactaaaactagaggatgcagatgtt
tggagagatgatggactaacagaggaaaggttcaaaaaagagagtattcctcccataaag
cctattaaggtgatcaaggaggagcagcggttgacaactatctctgagtcttctctggca
gagctgggaaagagctgcgaggtcatgcttagtcgacattcacttcctaacaagagctcc
gataaatccgatgtccacgtcaaagcagaagacagacacaaacctgaaaaagtaaaggaa
cacagagagaaagacagaaaccgggatagagagagggagaaagaaaagaagaggaagcat
ggtcacagccacagtagcagcaggaagcatgaagatagaaaagaaaagaagaaacataga
gaaaagcgagaggagatggccttttcctcttcttcatcatcttcctccactcattccagc
tccagccataagcggcacaaggatggcaagagccataaggagaagaaggatcgtcgaatt
cttggagacctcaacctccagcgcaaagaggggtctgacaagagtctgagtcattacgac
acggataaaaagaaacgtgcggacgcatccggtgccagctctactagtgaaggggagcac
gctgaatggacctcaagaaattctggggaaagatcatctgagcacaaaaaaggggctgaa
tctggttcctcgttaggctccacagacttcttgaaactgaaagcgttgtcagatgggcca
cccaaggagctgaaaatccgactgatcaaagttgagagtggggacagggagacattcatt
gcctcagaggtggaggaaaagaggatcccattggaggaaatcagcatcaagaacagtgcc
agtgaaatcatcaggtcctgcaagggtgccagagtgaagggaaagttcagagaatcttac
ttgctcccagccttttctgtcaagcccatcataaacccagaggaactcattccaagagag
aaactcaatcctcctacacctagcatctatttggagagcaagagggatgccttctcgcct
gtgctgttgcaattttgtacagaccccaagaatcctgttactgtcatcagaggcctggct
ggatccctaagactcaacctgggactgttttctactaagtcactggtggaagccaatgca
gagcaggcggtggaggtaaggactcaggtgcagcagcctgctgatgaaaactgggacccc
agtgggactggtcagacatggccctgtgagagcagccgctcccacaccaccattgccaag
tacgcccagtaccaggcatccagcttccaagagagtctacaggaggagaaaggcagtgat
gaggaggatgatgaagatgatgagaagaagccatccaatagttctgatacaccaagcaag
gacagcactaaagaaagtagcagtggtgagcagaaaccagtgggaaagatcattaaattt
ggaaccaacattgacctctcagatcccaaaaggtggaagccccagctacaagagttgcag
aagctgccagcatttatgcgtgtagcatccagtggtaacatgctgagccatgtgggccac
accatcttaggcatgaacactgtccagctctacatgaaggttccagggagccgaacgcca
ggtcaccaggagaacaacaacttctgctcggtgaacataaacatcggccctggagactgt
gagtggttctctgtccatgagaactactggcaggcaatcaatgacttctgtgaaaaacat
ggcgtggactacctgacagggtcctggtggccggtgttggaggatctttacagggccaac
atccctgtgtaccgcttcattcagcgaccgggagacttggtgtggatcaacgctggaact
gttcactgggttcaggccgtaggctggtgcaacaatattgcctggaacgttggacctctc
aacgcttaccagtaccagctggccctggagaggtttgaatggaatgaagtgaagaaggtc
aagtccatagtcccaatgattcatgtgtcctggaatgtggcccgcactgtcaagatcacc
gacccagaaacctacaagctgctcaaacactgcctgctgcagtccatgaagcacatccag
gtcctgcgggaccaactggttgctacaggcaaaaagatttcctatcagagtcgagtcaaa
gacgagcctgcctactactgcaatgagtgtgatgtggaggtgttcaatttgttgtttgtg
acaagtgagaacaacagcaggaagacatatgtggttcactgtgaggactgtgcacgtcac
cgtaaccccaacatgaacaacgtagtggtgctggagcaatactccatagaggagcttatg
aacacatacgactccttcaacctggtaagctttcccataatgccatctgtctcctttctg
acctga

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