Sphingobium indicum UT26S: SJA_C1-09100
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Entry
SJA_C1-09100 CDS
T01201
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03030
DNA replication
sjp03430
Mismatch repair
sjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJA_C1-09100 (dnaN)
03430 Mismatch repair
SJA_C1-09100 (dnaN)
03440 Homologous recombination
SJA_C1-09100 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjp03032
]
SJA_C1-09100 (dnaN)
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-09100 (dnaN)
Enzymes [BR:
sjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJA_C1-09100 (dnaN)
DNA replication proteins [BR:
sjp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJA_C1-09100 (dnaN)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJA_C1-09100 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BAI95744
NITE:
SJA_C1-09100
UniProt:
D4YZG2
LinkDB
All DBs
Position
1:914813..915925
Genome browser
AA seq
370 aa
AA seq
DB search
MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQIVESVSA
QVEQPGATTISAHTLFDIARKLPEGSQVSLHAAEGKMLIQAGRARFNLSTLPRDDFPVIA
EGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDDGQPVLKAAATDGHRL
ARVTVPRPDGADGMPGIIVPRKCIGELRKLLDEVDGSVQISLSASKIRFGLGSAILTSKL
IDGTFPDYSRVIPTANDKLLKIDPRSFEEGVDRVATIATEKTRAVKMTLDRDKITLSVTS
PENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDSDLVELHLADAAAPTLIREDDRSP
ALYVLMPMRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaccatcgaacgcgcaacgctgctcaagagcctcagccacgtccagtcggtg
gtcgagcggcgcaacacgattccgatcctgtccaacgtgctgatcgaagcgtccgcggac
ggcgcgatcaagctgatggcgaccgacctcgacctccagatcgtcgaaagcgtctccgcc
caggtggaacagcccggcgcgaccacgatcagcgcccacaccctgttcgacatcgcccgc
aagctgcccgaagggtcgcaggtctcgctccacgcggcggagggcaagatgctgatccag
gcgggccgcgcccgcttcaacctgtcgaccctgccgcgcgacgatttcccggtgatcgcg
gaaggcgatctgccgaccagcttcgaactgcccgccgaaacgctcaagcagatcatcgac
aagacgcgcttcgccatctcgaccgaagagacgcgctattatctaaacggcatttatttc
catgtgtcggatgacggccagcccgttttgaaggccgccgcgaccgacggccaccgcctc
gcccgcgtcaccgtgccccgtcccgacggcgcggacggcatgcccggcatcatcgtgccc
cgcaagtgcatcggcgaactgcgcaagctgctggatgaggtcgatggatcggtgcagatc
agcctgtccgccagcaagatccgcttcggcctgggcagcgcgatcctgaccagcaagctg
atcgacggcaccttccccgattacagccgcgtcatcccgaccgccaacgacaagctgctc
aagatcgacccgcgcagcttcgaggaaggcgtggaccgcgtcgccaccatcgccacggaa
aagacccgcgccgtcaagatgacgctggaccgcgacaagatcaccctgtccgtcaccagc
ccggaaaacggcacggcggcggaggaagtccccggcgccttccagggcgagggtttcgac
atcggcttcaacgcgcgctatctgctggacattcttggccagatcgacagcgacctggtg
gaactccacctggccgacgccgccgcgccgaccctgatccgcgaagacgaccgcagcccg
gccctctatgtgctgatgccgatgcgcgtttga
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