Streptomyces kanamyceticus: CP970_17210
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Entry
CP970_17210 CDS
T06849
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ska
Streptomyces kanamyceticus
Pathway
ska03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP970_17210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ska03021
]
CP970_17210
03400 DNA repair and recombination proteins [BR:
ska03400
]
CP970_17210
Enzymes [BR:
ska01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP970_17210
Transcription machinery [BR:
ska03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP970_17210
DNA repair and recombination proteins [BR:
ska03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP970_17210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QEU92413
UniProt:
A0A5J6GBF4
LinkDB
All DBs
Position
complement(4156500..4157522)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKMK
LNGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccctcggcaactccctgcgtcgg
acccttctctcctcgatcccgggtgcggccgtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcaccgacctcatcctcaacatc
aagcagctggtcgtttccagcgagcacgatgagcccgtcgtgatgtacctgcgcaagcag
ggtcccggtctcgtcaccgccgctgacatcgccccgccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggtcaggagatcggg
cgcatcccggtcgactcgatctactcgccggtcctcaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgtgacgccatggcgtccgccggtaagaccctggtcgagctgttcggt
ctggcccgtgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcccttgccgctgatctcgccctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcccgctccgag
gcggacctgctcgacattcgcaacttcggtgcgaagtcgatcgacgaggtcaagatgaag
ctgaacggcatgggtctcgcgctgaaggactcgcctcccggcttcgacccgaccgccgcc
gcggacgccttcggcgccgacgacgacgcggacgcgggcttcgtcgagaccgagcagtac
tga
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