Streptomyces koelreuteriae: KJK29_29740
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Entry
KJK29_29740 CDS
T09603
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg00040
Pentose and glucuronate interconversions
skg01100
Metabolic pathways
skg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KJK29_29740
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KJK29_29740
Enzymes [BR:
skg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KJK29_29740
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QWB26423
UniProt:
A0ABX8FYV5
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Position
6600942..6602228
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AA seq
428 aa
AA seq
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MRGRQLAVTAGLLALLCVPAHAEDRDISRDTLPANDGWAAEGAGTTGGAAADAEHVFTVT
DRAGLVRALDGGSDTPKIIRIAGTIDANTDDDGDRLDCSDYATGGYSLKKYLAAYDPRTW
GSAKPSGPQEEARQASAAEQAERIVLPVGSNTTLVGLGDSAVLKGASLQVKNADNVIIRN
LDVRDAYDCFPVWQPNTGGLGDWKAAYDAIWLTGATHVWVDHITASDRGHPDAKEPTYFA
RNYLRHDGLLDITGGSDLVTVSWSRFADHDKAMLIGNGDTATGDRGKLRVTLHHNAFESV
VQRAPRVRFGQVHVYNNRYDITGDYHRYSLGVSTESKIFAENNAFHAPGHVEVADLVKSW
NGSALHQSGTVFNGYPVDLLAIYNAYNSGSERDLTADVGWTPTLHGRIDSAEAADRAVAR
GAGAGRIR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcagacaactggctgtcaccgctgggctgctggcgctgctgtgcgtccccgcg
cacgccgaggaccgggacatcagccgcgacaccctgcccgcgaacgacggctgggccgcc
gagggcgcgggcaccaccggaggcgccgccgccgacgccgagcacgtcttcaccgtcacc
gaccgggccggactggtccgcgccctcgacggcggcagcgacaccccgaagatcatcagg
atcgccgggaccatcgacgccaacaccgacgacgacggcgaccgcctggactgctccgac
tacgccaccggcggctacagcctgaagaagtacctcgccgcctacgacccccgcacctgg
ggttccgccaagcccagcggcccgcaggaggaggcccgccaggcctccgccgcggagcag
gccgagcggatcgtgctgcccgtcggctccaacaccaccctcgtcggactcggcgactcg
gccgtcctcaagggcgccagcctccaggtcaagaacgccgacaacgtgatcatccgcaac
ctcgacgtacgcgacgcctacgactgcttccccgtctggcagcccaacaccggcggcctc
ggcgactggaaggcggcctacgacgccatctggctgaccggcgccacccatgtgtgggtc
gaccacatcaccgcatccgaccggggccacccggacgcgaaggaacccacctacttcgcc
cgcaactacctgcgccacgacggactgctcgacatcacaggcggctccgacctggtgacc
gtctcctggagccggttcgccgaccacgacaaggcgatgctcatcggcaacggcgacacc
gccaccggcgaccggggcaagctccgggtcaccctgcaccacaacgccttcgagtcggtc
gtgcagcgcgccccgcgcgtccgcttcgggcaggtgcacgtctacaacaaccgctacgac
atcaccggcgactaccaccgctactccctcggcgtctccaccgagtcgaagatcttcgcc
gagaacaacgccttccacgcccccggccatgtggaggtcgccgacctggtcaagagctgg
aacggcagcgccctgcaccagagcggcaccgttttcaacggctacccggtcgacctgctc
gcgatttacaacgcctacaactcgggcagcgagcgcgatctgaccgccgacgtcggctgg
acccccaccctgcacgggcggatcgacagcgccgaggcggccgaccgggccgtggcccgc
ggcgcgggagcggggaggatccggtga
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