Shewanella khirikhana: STH12_00785
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Entry
STH12_00785 CDS
T06711
Symbol
cysS
Name
(GenBank) Cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
skh
Shewanella khirikhana
Pathway
skh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STH12_00785 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
skh01007
]
STH12_00785 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_00785 (cysS)
Enzymes [BR:
skh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
STH12_00785 (cysS)
Amino acid related enzymes [BR:
skh01007
]
Aminoacyl-tRNA synthetase
Class I (G)
STH12_00785 (cysS)
Transfer RNA biogenesis [BR:
skh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
STH12_00785 (cysS)
Prokaryotic type
STH12_00785 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
KH_PARP14_4
Motif
Other DBs
NCBI-ProteinID:
AZQ09924
UniProt:
A0ABM7D0S7
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All DBs
Position
926056..927435
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AA seq
459 aa
AA seq
DB search
MLKIYNSISRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYE
VNYQRNITDVDDKIIKRANENGESCDSLTERLIGDMHADFDALNMVRPSFEPRATLHIDE
IIDMVNRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMD
FVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNTWMHTGMVMVDKEKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRS
QLNYSEDNLKQARAALERMYTALKGLDLTVAAAGGDEFVSRFVAAMDDDFNTPEAYSVLF
DMVREINRLKATDMAAASALAVVLKDLGAVLGILSSTPEAFLQGEGSADEVAEIEALIVE
RNRARAEKDWPAADVARDRLNALGVVLEDGPEGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatatacaacagtatcagtcgtcaaaaagaggagtttaaacctatacagccc
ggcaaagtcggtatgtatgtttgtggtgtgacgatctatgacctgtgccacatcggccat
ggtcgtacttttgtgtgttttgacatgattgtgcgttatctgcgttaccgtggttatgag
gtaaattaccagcgtaatatcaccgacgtggatgacaaaatcatcaaacgtgccaatgaa
aacggcgagagctgcgacagcctgactgagcgcctgattggtgatatgcacgcggatttc
gatgcgctgaatatggtgcgcccaagctttgagccccgcgctaccctgcacatcgatgaa
atcatcgacatggtgaatcgcctgctcgaccgtggtcatgcttatgtggcggccgatggc
gacgtactgtttgatgtgtcttcctacgccgcatacggccgtttgtcaggccaggacctc
gagcagttgcaagccggtgcccgggtggaagtggatgaaaacaagcgtaacccgatggac
tttgtgctgtggaagatgtccaagcccggcgagcctacctgggattcgccatggggtccg
ggtcgcccaggctggcacatcgagtgctcggccatgaacagcaagcacctggggctgcac
ttcgatatccatggcggcggcagtgacctgcagttcccgcaccatgaaaacgaaattgcc
cagtcctgctgcgcccacgacacaccttatgtgaacacctggatgcacacagggatggtg
atggtagataaagaaaagatgtccaagtcccttggcaacttctttaccatccgcgacgta
ctggctcattacgatgcccagaccgtgcgttacttcctgctctctggccactatcgcagc
cagctgaactacagcgaagacaacttaaagcaggcccgcgccgcccttgagcgtatgtac
acagcgcttaaaggtttggatttgaccgtggctgccgccggtggcgatgagtttgtcagc
cgctttgttgcagcgatggacgatgatttcaacaccccagaggcctattctgtgctgttt
gatatggtgcgtgaaatcaaccgtctcaaggcgaccgatatggcagctgcgtctgcgctg
gcagtcgtgcttaaagatctgggcgctgtgctcggtattctgtcttccaccccagaggca
tttttgcagggtgaaggcagcgccgatgaagtggctgaaatcgaagccttgattgttgag
cgtaaccgagcccgcgccgagaaagactggccggctgccgatgtagcccgcgaccgcttg
aatgcccttggcgtagtgcttgaagatggcccggaaggtaccacctggcgcaaaaagtaa
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