Shewanella khirikhana: STH12_01782
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Entry
STH12_01782 CDS
T06711
Symbol
icd_1
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
skh
Shewanella khirikhana
Pathway
skh00020
Citrate cycle (TCA cycle)
skh00480
Glutathione metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01200
Carbon metabolism
skh01210
2-Oxocarboxylic acid metabolism
skh01230
Biosynthesis of amino acids
Module
skh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skh_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STH12_01782 (icd_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
STH12_01782 (icd_1)
Enzymes [BR:
skh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
STH12_01782 (icd_1)
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GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AZQ10890
UniProt:
A0A3Q9E777
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Position
complement(2035948..2038173)
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AA seq
741 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPILQTFAEPAGVKIETRDISLSGRVIAAFPEKLTD
AQRIGDHLAELGELATKPEANIIKLPNISASIPQLKACIKELQAQGYDIPNYPEESKTDE
EKSIQARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKNPHSMGKWASDSKSHVSHMEA
GDFYGSEQSVTLADADSVSIVHTSKAGVETVLKSGLKLQAGEIIDSAVMSKNALVAFFER
EIDAAKSEDVLLSLHLKATMMKVSDPIMFGHAVKAFFKPLFAKHAETFERLGVDVNNGFG
DVVAKIQALPEAERAAIEADIQAVYAERPAMAMVNSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLKDTKFIIPDRCYAGVYDATINFCKAHGAFDPRTMGTIPNVGLMAQKAE
EYGSHDKTFEIAEDGVVTVVNAAGAVLMSHNVEAGDIFRMCQVKDAPIQDWVKLAVKRAR
LSETPAVFWLDKNRAHDAELIKKVEAYLPQHDTAGLELHILSPVEATQFSLARMKDGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVEQVQSENY
LRWDSLGEFLALAASFEHLAQTAGVAKAQVLADTLDTAIGKFLDENKSPARRVGQIDNRG
SHFYLAMYWAQALATQTADAELAAHFGQLADKLAANEETILAELIGVQGHSVDLGGYYRP
DFAKASAVMRPSATLNGLMSH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataattccccaacgattatttacactgaaaccgatgaggcgccagcactcgct
accctgtccctgctgcctatccttcagacatttgccgagcctgccggcgtgaagatcgaa
acccgcgatatctctctgtccggtcgcgttattgctgctttccctgagaagctgaccgat
gcccagcgcattggcgatcacctggctgaactgggcgagctggccaccaagccagaagcc
aacatcatcaagttgccaaacatttctgcctctattcctcagctgaaagcctgtattaaa
gagctgcaggctcagggttacgacatcccgaactaccctgaagagtcaaagactgatgaa
gagaagtctatccaggcccgttacgacaagattaaaggcagtgcggtaaaccctgtgctg
cgtgaaggtaactccgaccgccgcgcgccgctgtcggtgaaaaactatgcccgcaagaac
ccacattctatgggtaagtgggccagcgactccaagtctcatgtgtctcacatggaagcc
ggtgacttctacggctctgagcagtctgtgactctggccgatgctgatagcgtcagcata
gtgcacaccagcaaagccggtgttgaaaccgttctgaaatcaggccttaagctgcaagcc
ggtgaaatcatcgactcagccgtgatgagcaaaaacgccctggttgccttcttcgagcgc
gaaatcgacgccgccaagtccgaagatgtgctgctgtcgctgcacctcaaagccaccatg
atgaaggtgtctgaccccatcatgttcggccacgccgtgaaagctttcttcaagccgctg
tttgccaagcatgccgagacctttgagcgtctgggtgtggatgtaaacaacggttttggt
gacgtggtagccaaaatccaggcgctgccggaagccgagcgcgccgccatcgaagccgat
attcaggctgtgtatgccgagcgtcctgccatggccatggtgaactctgacaagggcatc
accaacctgcacgtgccaagcgacatcatcatcgatgcctccatgcctgccgctatccgc
tcttcaggccagatgtggggcccggacggtcagcttaaagacaccaagtttatcattccg
gatcgctgctacgccggcgtgtacgatgccaccatcaacttctgtaaagcgcatggcgcc
ttcgacccacgcaccatgggtaccatccctaacgtgggcctgatggcacaaaaagccgaa
gagtacggcagccacgacaagacctttgaaatcgctgaagatggcgtggtgactgtggtg
aatgccgccggtgctgtgctgatgagccataacgtggaagccggtgacatattccgtatg
tgtcaggtgaaagatgccccaatccaggattgggtgaaactggccgtgaagcgtgcccgt
ctgtctgaaaccccagcggtattttggctggacaagaaccgtgcccacgacgctgagctt
atcaagaaagttgaagcttacctgccgcagcacgacactgctggccttgagctgcacatt
ctgtctccggttgaagcaacccagttctcactggcgcgcatgaaagatggcaaagacacc
atctctgtaaccggtaacgttttgcgtgactacctgactgacctgttccccatccttgag
ctgggcaccagcgccaagatgctgtcaatcgtgccgctgatgaacggcggcggcctgttt
gaaaccggtgccggtggcagcgcgcccaagcacgttgaacaggttcaaagtgaaaactat
ctgcgttgggattctctgggtgagttcctggccctggctgcgtctttcgagcatctggca
caaactgccggtgttgccaaggcgcaagtgttggctgataccctggataccgctatcggt
aagttcctggatgagaacaagtcaccagcccgccgcgtcggtcaaatcgacaaccgtggc
agccacttctatctggccatgtactgggcccaggctctggccacccaaactgccgatgcc
gagcttgccgcacacttcggtcagctggctgataagcttgctgccaacgaagaaaccatt
ctggctgagctgattggcgtacagggccacagcgtggatctcggtggttactatcgccca
gattttgccaaggcaagcgcagtaatgcgcccaagcgcgaccctgaacggcctgatgagc
cactga
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