Saccoglossus kowalevskii (acorn worm): 100373746
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Entry
100373746 CDS
T04123
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04137
Mitophagy - animal
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100373746
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100373746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100373746
04121 Ubiquitin system [BR:
sko04121
]
100373746
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100373746
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100373746
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100373746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF_BIRC3_bd
zf-TRAF_2
zf-C3HC4_4
TRAF3_RING
TRAFD1-XIAF1_ZnF
zf-C3HC4
zf-C3HC4_2
Glyco_hydro_71
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100373746
NCBI-ProteinID:
XP_006824450
LinkDB
All DBs
Position
Un
AA seq
558 aa
AA seq
DB search
MTEFGYPLPIFSVSPGGKHMCTSGRHVLKDPIQTGCGHRYCRHCFNVLTTSFTQTGPVYC
KGCESEGYSDSVLLHNKIYPDRAILRELHQMTVSCIVQEECDWLGLLKEYDDHVTLCPHV
TITCVNKIGCGASMKRSNLSEHLDKHCPMRITKCKYCTEQIPYREIKEHNRVCDNYPVKC
EYCNQDTLSRKELKRHQDPENGDCSMKLVHCSFKTIGCDVLLPRGSVHDHDSEYIHMHQG
MLLKTCLDLNNQFEDMALDRNSLQTTCQQQARTDKKIEQLFQSIKTMEESLCRFSTDRSS
GAAFSIQQVDAAMTRYSKTAEELKNKNTVLENKLSTYEGIVAVLNSQIERDAQAVHTIEG
QQKRDRDLIESLERKIKSQDRIIALKDVALAEQNLMIQTLELASYDGIMVWKIADFNRRC
QEAVSGKTTSVYSQCFFTGRHGYKMCARVYLNGDGMGKGNHVSLFFVIMRGPNDAILRWP
FRQKVTFMWLDQNNRDHVVDAFRPDPTSNSFQRPKNDMNIASGCPLFMPLSQLHSPRHAY
VKDDVAFLKVIVDTTDLG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattcggatacccactacctatattcagcgtttcgccagggggaaaacatatg
tgtacaagtggtcgtcacgttttaaaagatccgattcaaactggatgtggacatagatac
tgcagacattgtttcaacgttttaacaactagctttacacaaacaggtcccgtctactgt
aaaggttgtgaaagcgagggatattcagactcagtcctgctacacaataaaatatatcca
gatagagctatactacgtgaattacatcagatgacagtcagttgtatcgtgcaggaggag
tgcgactggcttggcttacttaaagaatatgacgatcacgttactttatgtccgcatgtt
acaattacatgtgttaataaaataggatgtggtgcttcgatgaaaagaagcaacctttca
gaacaccttgacaagcactgtccaatgaggattactaaatgtaaatattgcactgaacaa
ataccgtacagagaaataaaggaacataatcgagtctgcgataactacccagtgaaatgt
gaatactgtaaccaagacaccctatcacgtaaagagttgaaacgccaccaggatcctgag
aatggggattgctccatgaaattagtccactgttcgtttaaaacgattgggtgtgatgtt
ttgcttccaaggggcagcgttcatgatcatgacagtgaatatatacatatgcatcaaggt
atgctgctaaaaacttgccttgatctgaataaccaatttgaggacatggcattggacaga
aattccctacagaccacttgtcagcagcaggcgcgtactgacaagaagattgaacaattg
tttcagagtatcaaaacaatggaagaaagtctctgtcgctttagtactgacagatcatct
ggagcggctttctcaatacagcaagttgacgcagcaatgacgagatattcaaagacagca
gaggaactcaaaaacaaaaataccgttttagaaaataagctttcgacttatgagggaata
gtagcagtattgaatagtcaaattgaaagagacgcacaggctgtacatactattgaagga
caacaaaaacgtgaccgagatcttatcgaatcactggaaagaaagattaaatcccaagat
aggataatagccctgaaggacgtggccttagcggagcagaatttgatgattcagactttg
gaactagcatcgtatgatggtatcatggtgtggaaaatagcagacttcaatcgacgttgc
caggaagctgtatcggggaagaccacatccgtttactcacaatgcttctttactggtcgt
catggttacaagatgtgcgcacgggtatatcttaacggcgatggaatgggcaaggggaat
catgtctcactgttcttcgtcatcatgcggggtccaaacgacgccatcttacgttggccc
tttcgacagaaggtaacttttatgtggttggatcaaaataatcgagaccatgtcgtcgac
gctttccgacctgatccaacgtcaaactcgttccaacgacctaagaatgatatgaatatt
gctagtgggtgccctctgtttatgccattatcccagcttcacagtccacgtcacgcttac
gtaaaagatgacgtggcatttctcaaagtgattgttgacactacagatttgggatga
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integrated database retrieval system
