Saccoglossus kowalevskii (acorn worm): 100374450 Help Entry 100374450         CDS       T04123                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04512   ECM-receptor interaction sko04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sko00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100374450  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100374450  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:sko00535]     100374450 Proteoglycans [BR:sko00535]  Extracellular matrix (ECM) proteoglycans   Others    100374450 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  100374450 NCBI-ProteinID:  XP_006811158 UniProt:  A0ABM0LTR7 LinkDB All DBs Position Un AA seq 831 aa AA seqDB search MRSRESRFTMELSFTICVSLLLCLQVNSQFDNDIDRICPDVRIGRDDLPEGESDDRGGFD LISKFNLGVKSEIAEGVSRVEGSTPLQTAFKMGKSSRLVVPASTIYPAGLPDEYSFVATY RMLGATVYDDWYLWQITDRSLRNQAAVRLNGQEQFLEFSYVDRNGIEQSVKFRNVDQLFD RKYHKILLSVRRDRVSLFIDCELTSTVGIGEKAPVVVRSDTVTALGRRYTDDQSVTFELQ WIILHCDPSIAARDTCEELPAMTDESGDCPITCPEGPPGAPGINGPQGLPGSNGPQGPQG LPGANGLPGVRGPPGEKGSQGASGPTGRQGIQGIPGNRGERGLPGLTGRDGNPGDSGPAG PKGSPGDAGPPGPPLNFEHIANQLQAVKGMPGLPGLTGPKGSKGESGEPGVPGPVGATGR AGPRGFSGPPGPPGPSGSPGIIYGNDGDQVGRLRGQPGASGFPGMPGMPGFKGHKGHPGR NGEPGKDGIDGTKGQKGEAGPRGRDGMNGVPGRQGEQGSLGDKGEIGQRGFPGTLGPTGP MGPRGMEGPPGARGEMGLKGERGPAGRNGLTGTQGQKGQKGEAGMDGMDGAQGPQGQKGA QGDVGLIGPSGKDGFMGLTGPPGPTGPAGMKGNQGKQGETGSRGARGLMGVQGMQGLPGL EGPIGKKGDRGQTGVAGDPGNQGPMGPRGETGPVGLKGQKGDLGVPGIQGQTGFPGPVGM KDYGNPKDAERRKKSDFSVISHNCEDGAKGVRGQEGKGIMGPEGPPGNPGVPGPQGLSLP GRDGERGPPGPPGITGEQGQVGLRGPPGYCEYCNYAPGLSPMGLSQKNIKG NT seq 2496 nt NT seq  +upstreamnt  +downstreamnt atgaggtcgcgagagtcgaggtttacaatggagttgtcatttacgatatgtgtgtcactg ttactttgcttgcaagtaaactcacagtttgacaatgatattgatagaatctgtcctgat gttaggatcggaagagacgatctcccagaaggtgaaagtgatgaccgaggtggttttgat ctgatcagtaaattcaatttgggtgtgaagagtgaaattgctgagggagttagtcgtgtc gaaggctcaacgcctttacagacagcattcaaaatggggaaatcgtcgcgattggtcgtg cctgccagtacaatatacccggctggattgccagacgaatattcgtttgtcgctacttac cgtatgttaggcgctacggtgtatgatgactggtatctgtggcaaattacggaccgttca cttagaaatcaggcagcggtgcggttgaatggacaagaacaattcctggaattctcttac gttgacagaaacggtatcgaacagtccgtcaagttcagaaacgtagaccaactattcgat cgtaaatatcacaagatacttctcagtgtacgaagagaccgtgtttctttgtttattgac tgcgagctgacatctacagttggcatcggcgagaaagcccctgtggtggtcagatcagac acagtaacggcactcgggaggcgatacactgacgaccagtctgttacgtttgagttacag tggataatactgcattgtgacccttccattgctgccagagacacctgtgaagaacttccg gctatgactgacgaatcaggggattgtcctataacatgcccagaaggacctccaggagca ccaggaatcaatggtccccaaggacttccaggttccaatggcccacaaggcccacaaggt ttaccaggagcgaatggattgccaggagttagaggaccaccaggagaaaagggttcacaa ggagcatctggtcccacaggtcgacagggcatacaaggcattcctggcaatagaggagaa agaggtttacccggtcttactggacgtgatggaaacccaggtgattccggtcctgctggc ccaaagggcagtcctggtgatgcaggtccacccggacctcccttgaattttgagcatatt gccaatcaactacaggctgtgaaaggaatgccaggtctgccaggactcactggacccaag ggttccaaaggagagtctggtgaacccggtgtaccaggaccagttggggctactggaagg gcaggacctagaggattttcaggaccacctggtccacccggaccttctggttcacctggt attatctatggtaatgatggagaccaagtgggaagactaagaggtcagccaggtgcttcg ggttttccaggtatgcctggtatgccaggttttaagggtcataaaggtcaccctggacgt aatggagaacctggtaaagatggcatagatggaacgaaaggtcagaaaggagaagcagga ccacgtggtagagatgggatgaatggtgttccgggaagacaaggtgagcaaggatcacta ggcgacaaaggagaaatcggtcagcgtggttttccaggaactcttggacctactggaccc atgggacccagaggtatggaggggccaccaggtgccagaggagagatgggtttgaaaggt gaaagagggccagctggaaggaatggtcttactggtacgcagggacaaaaaggacaaaag ggtgaggctggtatggacgggatggacggcgcgcagggtcctcagggacagaaaggagcc cagggtgacgtcggattaataggaccttcaggaaaggatggtttcatgggattgacaggt ccacctggtccaactggaccagcgggaatgaaaggaaatcaaggaaagcaaggagaaact ggatccagaggagctagaggattaatgggggtacaaggaatgcagggattgccaggtctt gaaggcccaattggtaagaaaggagatcgaggccagactggtgttgctggagatcctgga aatcaaggacctatgggaccgagaggcgagactggacctgtgggattgaaaggacagaaa ggtgatcttggtgttcctggcatccagggccaaactggatttccaggtcctgttggtatg aaggattacggtaatccaaaggatgcagaaagaagaaaaaaaagtgacttctcagttatc agtcacaattgcgaggatggtgcgaaaggagttcgtggtcaagaaggcaaaggcatcatg ggtccagaaggacctcctggcaacccaggtgttccaggtccacaaggtcttagcctaccg ggacgggacggcgaaagaggtccccctggcccacctggcatcactggtgaacaagggcag gttggtttacgtggccctcctggttactgtgaatattgtaactatgcaccaggattgtca ccaatgggattgagccagaagaacatcaaaggatag

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