Saccoglossus kowalevskii (acorn worm): 100378002
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Entry
100378002 CDS
T04123
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100378002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100378002
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100378002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CcmH_CycH
TPR_1
TPR_19
TPR_2
TPR_16
TPR_14
TPR_17
TPR_12
TPR_11
TPR_8
TPR_9
ARM_TT21_5th
ANAPC3
BTAD
ARM_TT21_2nd
TPR_Slam
TPR_EMC2
COG4_N
DUF7017
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
100378002
NCBI-ProteinID:
XP_006811551
UniProt:
A0ABM0LUW0
LinkDB
All DBs
Position
Un
AA seq
1550 aa
AA seq
DB search
MASGASKEIKNLLKNAKESIKNKDYKDALKHCKAVLKQDKGNYNAWVFVGVSAGEMDQPE
QARMAYKKAIDSDPQQILAWQGLCAFYEKHNIPAFKADLQDTYIKMMQIYENTDMKKWKE
VAKKLAQLHLQLGNEMQAITIWQSITNCKDLEEKDGIESWINISNILIGMKVVPPELTDL
METCLDTVLHSNTSMTDPELQLYYKKYISILMDKYAFVAETDKVENECSNMSTKFPTSTF
PLEVLSRFYLQRKLDSNSTRAHEIYTSLNTIDPSSSISIIGQGFVKLTKKDLIGARDLLL
EGLKGFDDFIFGWLYLCQSQWHIHDVDSVEVSANKALKLLKSDSKIPLGIKKPIEHELRY
MLHDAWTDSRISGNINKAIAAYSKLLEEDCDNLELLLGLCKSCIANNELDKAKEYIDKAM
ETHSTQCSVLAMYGWIQFLHGNLSEALKRLTDVIEMSGDSGLYYYWLARINWEIGKEERM
DRNKCFNNFLKAAKLDPYHSDTFLYLGYYYENVTGDIKKAKRCYQKSFDLDRRNDEAGAA
LGDALISLDEQESALQLYTSVTSRASAGSAKWAWLRLGLYQLKKQEYSQAISSLQCALRA
DPKDVCCWECLAEAYMSRGSYTAALRAFTKAAELDDSSIYCHFQIAAIKQTLGLLSEAVA
EYTIILVNSPNYVPALKGIGESYISLAKTARIEFFNGRAVDHIGNAVMYLSTAIRNRPDM
SCHWKLLGDACTMIHPIDHHLVRISIPRFLTEKGCKDEGVQLVGKMEMLALGAKCYGRSL
SLKPECSPLWHDLGVNYYRQAENLKDDVKAKEVAKKALQCLQKAVSFDVSNHLHWTALGV
IASSKYINNAKLSQHAFIKSINAENNNVVAWTNLGVLYLVHHQVELAHKAFKIAQSLEPS
YVACWIGQALIAESIGSQEAMDLFRHATELGTHLEGCLGYAHWVCNTIFDEKVDKTSEYY
KYNIIQMRAVTAAVVAMAKYTDRVHSDSTAYNMYGVLLEHTGLSQQSESSLGKAVQLLQE
SGNTTQLNIVLSNHAKMLCAIGKYEESVSVYLSIKPLSDVNDICGLAAALYKSNKLKESY
QAFEQALQVATNDGDKSSILAAMGMVSYHFNDVDRAKTLLFKCSQFSPSCTHGILALCAL
GLRQGDYTLASAALTELLKLGDNDQLSADISFMSACLYALQGSYITAKNQILKSIHRFPW
RAILWQQASKFILQYIPDKAKVAVNCGKVANIHGITECKKSHSVLAMCQLAAGDHSNRNH
GNNAIKTAQKMVHRNPGDLQQWAQLAACCYADECNRQAMTTTSIADGSLSFNLSQNVVQQ
AERNSDGSGLRLLHWAVKMSAESLLLSGNNKKANDFIQKAMSLYSSSPQLMSQLELLFAK
SLTTQHMSDDDLDILRNSVIKEASSAQAWQILAEVYTCKEMMVAAEMCYRQSLQMSRSAK
TVPLIRLANLAMMLSRPGEANTDTWSSLCHEATNEVLKIQPQCSTALLLQGIMQYYKKNH
RHVKKCLHRVIDLGAGYAVSVARLYLIQLYLEKNETQAVKVYNQMMSRTF
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggagcgagtaaagaaataaaaaatctgctaaaaaatgccaaggaatccatc
aagaacaaagattacaaagatgctttgaaacactgtaaagcagtattaaagcaagacaag
ggcaactacaatgcatgggtgtttgttggtgtgtctgctggtgaaatggaccagccggag
caagcaaggatggcttataagaaagccattgactcagatccacagcagatcttagcatgg
cagggtctgtgtgcattctatgagaaacataatatccctgcattcaaggctgatctacaa
gatacttacatcaaaatgatgcaaatctatgaaaatactgacatgaaaaaatggaaagag
gttgccaaaaaactcgctcagttacatctgcagcttggtaatgaaatgcaggcaattaca
atatggcagagtatcactaactgtaaagatttggaagaaaaagatgggattgaatcctgg
ataaatatatccaatatattgattggtatgaaagttgtaccaccagagttgactgattta
atggagacatgcttggatacagtgttacactcgaatacatccatgactgatcctgaatta
cagctttattataagaaatatatcagtattttaatggataaatatgcatttgttgctgag
accgataaggtggaaaatgaatgttcaaatatgtctaccaaatttcctacttcaacattt
cctcttgaagttttatctaggttttatttacagagaaaactagattctaactctacaaga
gcacatgaaatatacaccagcttaaacaccattgatccgtcatcgtcaatatctattatt
ggacagggatttgttaaactgacgaagaaggacttaattggagcaagagatctgttatta
gaaggattgaaaggttttgatgacttcatctttggctggttatacttatgtcaatcacag
tggcacatccatgatgtagacagtgtagaagtctctgctaacaaagctctgaagttattg
aaaagtgattccaaaataccattaggcattaagaaaccgattgaacacgagttacgatat
atgttacatgatgcgtggacggacagccgaatatctggcaacatcaataaagcaatagcg
gcatatagcaagttattggaagaagactgtgataatcttgagttgttacttggattatgt
aaatcctgtattgccaataatgaacttgacaaggctaaagagtacattgacaaagctatg
gagactcacagtacacagtgttcagtgctggctatgtatggatggatacagttcttacat
ggcaatctatctgaagctctgaaaagattgacagatgttattgagatgagtggtgacagt
ggattatattattattggttggcaagaattaactgggaaattggaaaagaagagaggatg
gatagaaataaatgttttaataattttctgaaggcagctaaacttgacccataccattca
gataccttcttgtacttgggatattattatgaaaatgtcactggagatatcaaaaaagca
aaaagatgttaccagaaatcatttgatcttgatagaagaaatgatgaagcaggagctgcc
ctgggtgatgcgttgatttctcttgatgaacaagaatctgctctgcagctgtacaccagt
gtaaccagtcgtgctagtgctgggtctgccaaatgggcgtggctcagacttgggttgtat
caactcaaaaagcaagaatattctcaagcaatttctagtctacagtgcgctctcagagct
gaccctaaggacgtgtgttgttgggaatgtttagccgaagcttatatgagtagaggaagt
tatacagcagcactcagagcattcaccaaagcggccgagcttgatgacagttcaatctat
tgccattttcaaattgctgccatcaaacaaacacttggattgttaagtgaagctgttgcc
gagtatacaattattctggtgaattctcccaattatgttcctgctttgaaaggaattggt
gagagttatatttcgctggctaaaaccgctcgcattgagtttttcaatggaagagcagtc
gatcacatcggtaatgccgtaatgtacttatctactgcaataagaaacagacctgatatg
tcatgccattggaaacttctcggcgatgcttgcacaatgatacatcctattgaccatcat
ctagtcaggatctcgattccaagatttttgactgaaaaaggatgtaaagatgaaggagta
cagttagtagggaagatggaaatgttggcactgggggcaaaatgttatggtagatctctg
agtttgaaaccagagtgcagccctctgtggcatgatttaggagttaactactatagacaa
gcagagaacttaaaagatgatgtcaaggccaaggaagttgctaagaaagcattacagtgt
ttgcagaaagctgtaagttttgatgtctctaaccatctccactggacagctttgggtgtc
atcgcttcttccaaatatataaataatgctaagttatcacagcatgcatttatcaaatca
atcaatgctgaaaataataatgttgttgcctggactaacttgggtgtgttgtatcttgtc
catcatcaagttgagttggcgcacaaagcatttaaaatagcccagtctttagaaccatct
tacgtggcttgctggattggacaggcattgattgctgaaagcatcggtagtcaagaagca
atggatctattcagacatgcaactgaactaggcacccatttagaaggatgccttggttat
gcccactgggtatgtaatactatatttgatgaaaaagttgataagacgtcagaatattat
aaatataatatcatacagatgagggctgtaactgcggctgtggttgccatggcgaaatac
acagatagagtacattctgactctactgcctacaatatgtacggtgtattactagaacac
acaggactctctcaacaatctgagtctagtcttggaaaggctgtccagttattacaagag
agtggtaatacaacacagctaaatatagtgttatcaaaccatgcaaagatgttatgtgca
attggaaagtatgaagagtctgtctctgtatatctgtctattaagccattaagtgatgtc
aacgacatctgtggattggctgcggcattgtataaaagtaacaaattgaaagaaagttat
caagcatttgaacaggctttacaagtggctaccaatgacggtgacaagtcgagtatactg
gcagccatgggaatggtatcatatcacttcaacgatgtcgatagagctaaaaccttgcta
tttaaatgttcacagttttccccatcctgtacgcatggtatactggctctgtgtgccttg
ggtttacgacaaggtgattacaccctagcatcagcagctctcacagaactactgaaactt
ggcgataatgaccaattgtctgccgacatctctttcatgtcagcatgtctgtatgcattg
caggggagttacatcactgcaaagaaccaaattctcaaatcaattcacaggttcccatgg
cgagctattctttggcaacaggcttccaaatttatactgcaatatataccagacaaggcc
aaggtagccgtaaattgtggcaaagtcgctaatatacatggtatcaccgaatgcaagaaa
tcacattctgtacttgctatgtgtcagttagctgctggtgatcattctaatcgtaaccat
ggtaacaatgccattaaaactgcacaaaaaatggtccatcgtaatccaggtgatcttcaa
caatgggcacagctagctgcttgttgctatgccgatgagtgtaaccgccaggctatgaca
acgacatccattgcagatggtagtttgagtttcaacctgtctcaaaatgttgttcagcaa
gctgaaagaaactctgatgggagtgggttgaggctactgcactgggctgttaaaatgtca
gctgaaagtctgttattatctggaaataacaagaaagcaaatgattttattcaaaaggcg
atgtctttgtacagctcttcccctcagctgatgtcacaattagaattgttatttgcgaag
tctcttacaacgcaacatatgagtgatgatgatttagatattctgaggaattctgttata
aaagaggccagctcagcgcaggcctggcagatattagctgaagtgtacacgtgtaaagaa
atgatggttgctgcagagatgtgttatcgccagagtctacagatgtcgaggtcagctaaa
acagtacctcttattagacttgcaaacctggccatgatgttatcaaggcctggtgaggcc
aatacagatacatggtcttccctttgtcatgaggcaaccaatgaagtattaaagatacag
ccacagtgttccacagctctcttactgcaagggattatgcaatattacaagaagaaccac
aggcatgtaaagaaatgtctgcatcgagtgatagatcttggagctggttatgctgtatct
gttgccagattatatctgattcaactgtatttagaaaagaatgaaacacaggctgttaag
gtatataatcagatgatgtcaagaaccttttag
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integrated database retrieval system
