KEGG   Sphingomonas koreensis: BRX40_15560
Entry
BRX40_15560       CDS       T04828                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
skr  Sphingomonas koreensis
Pathway
skr02024  Quorum sensing
skr03060  Protein export
skr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:skr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BRX40_15560
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BRX40_15560
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BRX40_15560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:skr02044]
    BRX40_15560
Enzymes [BR:skr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BRX40_15560
Secretion system [BR:skr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BRX40_15560
  Eukaryotic Sec-SRP protein
   BRX40_15560
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_30 Zeta_toxin AAA_22 AAA_33 AAA_31 AAA_16 ABC_tran TctA APS_kinase AAA_19 6PF2K Thymidylate_kin ParA VirC1 Fer4_NifH MobB ArsA_ATPase AAA_17 ResIII ATP_bind_1 AAA_24 AAA_5 AAA_25 AAA YqeC KTI12 NTPase_1 MMR_HSR1 NACHT cobW nSTAND3 AAA_7 AAA_14 TsaE
Other DBs
NCBI-ProteinID: APR53649
UniProt: A0A1L6JCH6
LinkDB
Position
complement(3186076..3187557)
AA seq 493 aa
MFDSLSERLGGVFDRLKGRGALTEADVRTAMREVRIALLEADVALPVARQFVETVTEQAV
GEKVLRSVTPGQQVVKIVNDALIEMLGPDTAELALDVTPPAVVMMVGLQGSGKTTTTAKI
ARLLKKQGKKVMMASLDVNRPAAQEQLAVLGTQIEGATLPIVAGQQPVDIARRALQAAKL
QGFDVLMLDTAGRLHVDQQLMDEMKAVADISKPQEILLVVDSLTGQDAVNVAQSFSDQVP
LTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGVGEKLDAIEPFHPQRVAGRILGMGDVV
SLVEKAAQAIEQEDAEKMAARLAKGQFDMNDLRGQLAQMRRMGGLGALAGMIPGMKKAQA
AMAAGNVDERILLRMDAMITSMTPKERSKPELINAKRKIRIAKGSGTTVQDVNKLLKMHQ
EMSTAMKRIKKMGGLKGMLGMLGKGGMGGLGNALGGPQMGEMMGKLGGPGGGIPGLPGGE
IPPDLAKLLNNKK
NT seq 1482 nt   +upstreamnt  +downstreamnt
gtgttcgatagcctgagcgagcggcttggcggcgtattcgaccgtctcaagggccgtggc
gcactgaccgaagccgatgtgcggaccgcgatgcgcgaagtgcgcatcgcgctgctcgag
gccgacgtcgcactccccgtcgcgcgccagttcgtcgagacggtcaccgagcaggcggtc
ggcgaaaaggtgctgcgctcggtcacgccgggccagcaggtcgtcaagatcgtcaacgac
gcgctgatcgagatgctcgggccggacacggccgaactcgcgctcgacgtcaccccgccc
gccgtcgtgatgatggtcggcctgcagggctcgggcaagaccaccaccaccgccaagatc
gccaggctgctgaagaagcagggcaagaaggtgatgatggcgtcgctcgacgtcaatcgc
ccggccgcgcaggaacagcttgcggtcctcggcacgcagatcgagggtgcgacgctaccg
atcgtcgctggccagcagccggtcgatatcgcccgccgggcgctccaggcggcgaagctc
cagggcttcgacgtgctgatgctcgacaccgcgggccgcctgcacgtcgatcagcagctg
atggacgagatgaaggcggtcgccgacatctcgaagccgcaggaaatcctgctcgtcgtc
gacagcctgaccggccaggacgcggtcaacgtcgcgcagagcttctccgatcaggtcccg
ctcaccggcgtcgtgctcacccgcatggacggcgatgcgcgtggcggtgccgccctctcg
atgcgcgccgtcaccggcaagccgatcaagttcgccggcgtcggcgaaaagctcgacgcg
atcgagcctttccatccgcagcgcgttgccggccgcatcctcggcatgggcgacgtggtc
tccttggtcgagaaggccgctcaggcgatcgagcaggaagacgccgagaagatggcggcg
cggctggccaagggccagttcgacatgaacgacctgcgcggccagcttgcgcagatgcgc
cgcatgggcggcctcggggcgctcgccgggatgatcccgggcatgaagaaggcgcaggcg
gcgatggccgcgggcaatgtcgacgagcgcatcctgctccgcatggacgcgatgatcact
tcgatgacgcccaaggagcgcagtaagcccgagctgatcaacgccaagcgcaagatccgc
atcgccaagggttcgggcacgaccgttcaggacgtgaacaagctgctcaagatgcaccag
gaaatgtccaccgcgatgaagcgcatcaagaagatgggcggcctcaagggcatgctcggg
atgctcggcaagggtggcatgggcggcctcggcaatgcgctgggcggtccgcagatgggc
gagatgatgggcaagctcggcggtccgggcggcggcatccccggcctgcccggcggcgag
attccgccggacctggcaaagcttttgaataacaagaagtaa

DBGET integrated database retrieval system