Salinivibrio kushneri: FCN78_02595
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Entry
FCN78_02595 CDS
T05956
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sks
Salinivibrio kushneri
Pathway
sks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCN78_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sks03400
]
FCN78_02595
Enzymes [BR:
sks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FCN78_02595
DNA repair and recombination proteins [BR:
sks03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCN78_02595
Prokaryotic type
FCN78_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCP01386
LinkDB
All DBs
Position
1:537274..537957
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AA seq
227 aa
AA seq
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MTQAQTWQQVLADEKQQAYFRETLAYVEQTRANGVTVFPPKEDVFNAFRYTELGDVKVVI
LGQDPYHGPNQAHGLCFSVRPGVKTPPSLVNIYKELATDIEGFTPPSHGYLKSWAEQGVL
LLNTVLTVEQGKAHSHAKLGWETFTDRVIEAVNQQCQGVVFLLWGAHAQKKGKAIDRQRH
HVLTAPHPSPLSAHRGFFGCQHFSQTNALLQAQGKMPIDWQPYLDTE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggcgcaaacgtggcagcaagtgctggctgatgagaaacaacaagcttacttt
cgcgaaaccctcgcctatgttgaacaaacacgtgccaatggcgtgacggtttttccaccg
aaagaagatgtgtttaacgcctttcgctatactgagctgggcgacgtcaaggtggtgatt
ctgggccaagacccgtatcacgggccgaaccaagctcacgggctgtgcttttctgtgcgt
ccaggcgtgaaaacaccaccgtcattggtcaatatctacaaagagcttgccaccgatatt
gaaggctttacgccaccttctcacgggtatttaaaaagctgggcagagcaaggtgtgttg
ttgcttaataccgtgctcaccgtggagcaagggaaggcacactcccacgccaaactggga
tgggaaaccttcacggatcgtgtcattgaggcggtaaaccaacaatgccaaggcgtggtg
ttcttattatggggcgcgcacgcccagaaaaaaggcaaagcgattgatcgtcagcgccat
catgtactcaccgcgcctcatccgtcgccactgtcagcgcatcgtggcttttttggttgt
cagcacttttcacaaaccaatgcgctgttgcaagcgcagggaaaaatgcccattgattgg
cagccttatctcgatacggagtag
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