Skermanella sp. TT6: IGS68_17445
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Entry
IGS68_17445 CDS
T07020
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
skt
Skermanella sp. TT6
Pathway
skt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IGS68_17445 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_17445 (xth)
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IGS68_17445 (xth)
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IGS68_17445 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QQP87858
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Position
3704751..3705524
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AA seq
257 aa
AA seq
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MKIATWNVNSVKARLPNVLAWLERASPDVVLFQEIKCETASFPKQDFEALGYSCAVVGQK
SYNGVALLSKQPAEDVLDHLPGDAEDTQGRYVEATVAGVRIASLYLPNGNPVGTEKYPYK
LRWMERLRRHAAELLKTEQPFVLGGDYNVIPAPEDVYDPQAWETDALFRPETRAQFRALL
NLGLTEAFRAVHPDEARAYTFWDYQAGRWPRDQGIRIDHFLLSPQAADRLADCRIDRGPR
GEEKASDHTPVVLELAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaacgtcaactccgtgaaggcccgcctgcccaacgtgctggcg
tggcttgagcgcgcgtcgccggatgtcgtcctgttccaggagatcaagtgcgagaccgcc
tccttcccgaagcaggatttcgaggcgcttggctatagctgtgccgtcgtcgggcaaaag
agctacaacggcgtggcgttgctgtcgaagcagccggccgaggacgtgctggaccacctg
cccggcgacgccgaggacacccagggccgctatgtcgaagccaccgtggccggcgtccgc
atcgcctcgctctacctgcccaacgggaatcccgtcgggaccgagaagtacccgtataag
ctccgctggatggaacggctacgccgtcacgcggcggaactgctcaagaccgagcagccc
ttcgtgctgggaggagactacaacgtcatccccgcccccgaggacgtctacgacccgcag
gcgtgggaaaccgacgccctgttccgccccgagacccgcgcccagttccgcgccctgctc
aacctgggcctgaccgaggccttccgcgcggtgcatcccgacgaggcccgcgcctatacc
ttctgggattatcaggccggccgctggccgcgcgaccagggcatccgcatcgaccatttc
ctgctgtcgccccaggccgccgaccgcctcgccgattgccggatcgaccgcggcccgcgc
ggcgaggagaaagcgtcggaccacaccccggtcgtcctggaactggcggactga
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