Sulfuricurvum kujiense: Sulku_1396
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Entry
Sulku_1396 CDS
T01370
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sku
Sulfuricurvum kujiense
Pathway
sku03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sulku_1396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sku03400
]
Sulku_1396
DNA repair and recombination proteins [BR:
sku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sulku_1396
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sulku_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
AAA_22
AAA_25
DnaJ_CXXCXGXG
AAA_33
Viral_helicase1
RNA12
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADR34058
UniProt:
E4TYR7
LinkDB
All DBs
Position
complement(1410594..1413410)
Genome browser
AA seq
938 aa
AA seq
DB search
MDKIKIIGAREHNLKNISLEIPKNKLIVCTGISGSGKSTLAFDTLYAEGQRRYIESLSSY
ARQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARIGVQHC
HLCGKPISKMSAQDIITQVLKLPEGSKIVILAPLVREKKGSFADILESLRHKGYVRAMID
GVMVRLDEEIDLSKTKKHTLKVVIDRLIIKDDNHDRVAQDVEKALKESYGEVEIEIQNHD
EVGMADKLIHYSEHSACFDCKVSFDPLEPLSFSFNSPKGACSECDGLGIRYALDYDKIID
SELPIEKGAIKIVYGFNKGYYFTFLKAFCAAEGISITAPFYALEEYQKKAILHGSVDEVE
FKWQDHPIKRVWPGIVRIAYDIFKDEKDLADYMSEKPCNICNSHRLKRESLAVRVAQKGI
GDVISMPLKDSYAWFADPKTFDGLSDQNAMIAAPILNEIRERLFFLFDVGLGYLSLSRDA
RTISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLKLIRTLRSLQEKGNTVIVV
EHDKETIENADYIVDIGPGAGKFGGNVVFAGTLEEMKQSNTLTADYLSGRKQIKYFYRRE
QKEWMAINNVTLNNITNLSVKIPLHNFVCVTGVSGSGKSSLILQTLLPVTREILNHARKI
NRVAGVEVEGLEKLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRNLFTKTKEAQIRGYTA
SRFSFNVKGGRCEKCQGEGEIKIEMHFLPDIMVKCDSCHGSRYNLQTLQVEYKGKTISDV
LNMSVGEALEFFAPIPKIKAILQTLSDVGLDYITLGQNAVTLSGGEAQRIKLAKELSRRD
TGNTLYILDEPTTGLHFDDVNRLTKVLHNFVELGNSVLVIEHNLDMIKNADYIIDMGPEG
GSGGGLLVAQGNPEEVAESWEKTGSFTGKYLALELNRL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattaaaattatcggagcacgggagcataacctcaaaaacatctctttggag
atcccgaaaaacaagctgattgtatgtaccggaatcagcggaagcggtaaatcgacattg
gcctttgacaccctttatgccgagggacagcgccgctatatcgagtctctctcatcgtat
gcccgtcaatttttggaccgtgtcggaaagcccgatgtcgataaaatcgaaggcctcact
ccggctattgcgatcgatcaaaaaacgacctcaaaaaatccccgttcaaccgtaggaacg
attaccgagatctatgactatctgagacttttgtatgcccgtatcggagttcaacactgt
catctgtgcggcaagccgatatccaaaatgtcggctcaagatataatcacacaggtttta
aagcttcccgaaggttccaaaatcgtcatacttgcaccgctcgtacgggagaaaaaaggc
tcctttgccgatattctcgaatcgctccgtcataaagggtatgtacgtgccatgatcgac
ggcgtcatggtgcgtctggatgaagagattgatctctccaagaccaaaaaacatactctt
aaagttgtgattgaccgtctcatcataaaagatgacaaccatgaccgtgtggcccaagac
gtcgaaaaagcgctcaaagagtcttatggagaggtagaaattgagattcagaaccacgac
gaagtagggatggctgacaagctgatccactacagtgaacacagcgcctgttttgactgt
aaagtgagttttgatccgctcgaaccgctctcgttttcgtttaactctcccaaaggggca
tgttctgaatgcgacggcctcggcatccgctatgcgctcgattacgacaaaattatcgat
tccgaactccccatagagaaaggggcgataaaaatcgtttacggatttaacaaagggtat
tattttaccttcctaaaagcgttttgcgctgcggaagggatcagtattacggctccgttt
tatgcactcgaagagtatcagaaaaaagcgatcctccacggcagcgtcgatgaagtcgaa
ttcaagtggcaggaccatcctatcaagcgtgtatggccgggaatcgtacgcatcgcatac
gatattttcaaagatgaaaaagatctcgccgattacatgtccgaaaaaccgtgcaacatc
tgtaattctcaccgtctcaagcgcgaatcgcttgccgttcgcgttgcccaaaaggggatc
ggggatgtgatatcgatgccccttaaagattcgtatgcgtggtttgccgatccaaagaca
tttgatggtctgagcgatcaaaatgcaatgattgccgcaccgattttaaatgagatacgc
gaacgtcttttctttttgtttgatgtcggtttaggatacctctccctcagccgcgacgcc
cgcaccatcagcgggggggaagcccagcgtatccgtatcgcttctcagatcggaagcggt
ttgacaggggtaatgtatgttctggatgagccgagtatcggattgcatgaacgcgatacc
ctcaaactgattcgaacgctccgttcattgcaggaaaaagggaataccgttatcgttgtc
gaacatgacaaagagacgattgaaaatgccgactacattgttgatatcggccccggtgcc
ggaaaattcggcggtaatgtcgtctttgcaggtacgttggaggaaatgaaacaatccaat
accctcacggccgactacctctctggacgcaaacaaatcaaatatttttatcgacgcgaa
caaaaagagtggatggcaatcaataatgttacattaaataatattaccaatttgagcgta
aaaattccacttcataattttgtctgtgtaacgggagtcagcggcagcggaaaaagctct
ctgattctgcagacgttgcttcccgttactcgcgaaatactgaaccatgcacgtaaaata
aaccgtgtcgccggggtcgaagtagaaggtctggaaaaactcgacaaagtgatctatctc
gatcaaagcccgatcggacgtacgcctcgttcgaaccctgccacttatacgggtgtcatg
gacgaaattcgaaatctattcacgaaaaccaaagaagcacagatccgcggctatacggca
tcgcgctttagctttaacgtcaaaggggggcgatgtgaaaaatgtcagggagaaggggaa
atcaagatcgaaatgcacttccttcccgacattatggtcaagtgtgattcgtgtcacgga
agccgatacaatctccaaacacttcaggttgagtataaagggaaaaccatctccgatgtt
ctgaatatgtcggtcggcgaagcactcgaattttttgcaccgatcccgaaaatcaaagcg
attctacagacacttagcgatgtcgggcttgattacattacgctgggacaaaatgccgtt
accctctcaggaggggaagcgcagcggattaaactggccaaagagcttagccgacgcgat
acgggaaataccctctatatccttgatgaaccgacgacgggtctgcattttgatgacgtc
aaccgtttgacaaaggtacttcataatttcgtcgaactcggtaactccgtactggttatc
gagcacaatctcgatatgataaaaaatgccgactatatcatcgatatggggcctgagggg
ggcagcggcggcggattattggtcgcgcaggggaaccctgaagaagttgccgagagctgg
gaaaaaacgggaagtttcaccggaaaatatttagctcttgagctaaataggctataa
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