Streptomyces koyangensis: D0C37_16960
Help
Entry
D0C37_16960 CDS
T06436
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sky03021
]
D0C37_16960
Transcription machinery [BR:
sky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0C37_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
GerE
HTH_Crp_2
MarR
HTH_17
HTH_3
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AXQ56132
UniProt:
A0A385DCG3
LinkDB
All DBs
Position
complement(3881320..3882204)
Genome browser
AA seq
294 aa
AA seq
DB search
MPGAGAAPGAETAPGSGTGPGRTQRSAPFRPGRASDPAARKRGADTRALTQLLFSQLKEV
EPGTAEHARVRSALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGV
QFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVTSATEDLTTAHGRSPTTAEIAE
RLRISEDEVLACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLL
VQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIDP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgccggagccgccccgggcgccgaaaccgcgcccggctccgggacgggcccg
gggcggacgcagcgcagcgcgcccttccggccggggcgcgcctccgacccggccgcccgc
aagcgcggggcggacacccgcgcgctcacccagctcctcttctcccagctcaaggaggtg
gagccgggcaccgccgagcacgcccgggtccgcagcgccctcatcgaggccaacctgccc
ctggtccggtacgccgccgcccgcttccgcagccggaacgagccgatggaggacgtggtc
caggtcggcaccatcggcctgatcaacgccatcgaccggttcgacccggaccggggcgtg
cagttcccgaccttcgcgatgccgacggtggtcggcgagatcaagcggtacttccgggac
aacgtccgcaccgtgcacgtaccgcgccggctccacgagctgtgggtgcaggtcaccagc
gccaccgaggacctgaccaccgcgcacggccgctccccgaccacggccgagatcgccgag
cggctgcggatcagcgaggacgaggtgctcgcctgcatcgaggccggccgctcgtaccac
gcgacctcgctggaggcggcccaggagggcgacgggctcccgggcctgctcgaccggctc
ggctacgaggacccggcgctcgacggcgtggaacaccgcgacctcgtccgccacctgctg
gtccagctccccgagcgcgagcagcgcatcctcctgctgcgctactacagcaacctgacg
cagtcccagatcagcgcggagctgggcgtctcgcagatgcacgtctcccgtttgctggcc
cggagcttcgcgcggctgcgatccgcaaacagaatcgatccctaa
DBGET
integrated database retrieval system
