Streptomyces koyangensis: D0C37_27930
Help
Entry
D0C37_27930 CDS
T06436
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sky03051
]
D0C37_27930 (pafA)
Enzymes [BR:
sky01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
D0C37_27930 (pafA)
Proteasome [BR:
sky03051
]
Prokaryotic proteasome
Bacterial regulatory particles
D0C37_27930 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
AXQ58053
UniProt:
A0A385DHU0
LinkDB
All DBs
Position
6241049..6242410
Genome browser
AA seq
453 aa
AA seq
DB search
MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKSGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVDRRGIRTGTV
EQVLELWGRTLDAIEEEDLDRVATEIDWVMKYKLLERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKNGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgtctgtcgcctgacgaggtggcgcgctacctcttccgccgcgttgtgtcatgg
ggccgcagcagcaatgtgtttctgcggaacggcgcccgcctgtatctcgatgtgggttcg
catccggaatacgccacaccggaatgcgacaacgtcaccgaactggtgacccacgacaag
tccggggaacgcatcctcgaagggctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactccgccgggaactcctac
ggctgccacgagaactacctcgtggcccggcacggggagttctcccgcctcgcggacatc
ctcatccccttcctcgtgacccggcagctcctctgcggggccggcaaggtgctccagacc
ccccggggtgcggtgtactgcgtcagccagcgcgccgagcacatctgggagggcgtcagc
tccgcgacgacccgctcccgcccgatcatcaacacccgcgacgaaccgcacgcggacgcc
gagcgctaccgccgcctgcacgtcatcgtcggcgactcgaacatgtccgagaccaccatg
ctcctcaaggtcggcgccaccgacctggtgctccgcatgatcgaggccggcaccgtgatg
cgcgacctcaccctggagaacccgatccgggccatccgcgaggtcagccacgacatcacc
ggccgccgcaaggtccgcctggccagcggccgcgaggcctccgccctggaggtccagcgg
gagtactacgagaaggccgtggacttcgtggaccgccggggcatccgcaccggcaccgtc
gagcaggtcctggagctctggggccgcaccctcgacgcgatcgaggaggaggacctcgac
cgggtcgccaccgagatcgactgggtcatgaagtacaagctcctggagcggtaccgggca
aagcacaacatgaccatgtcccacccccgggtcgcccagatagacctcgcctaccacgac
atccaccgcaggcgcggcctctactacctcctggagaagaacggccaggccgcccggatc
tgcaacgacctgaagatcttcgagggcaagtccgtcccgccgcagaccacccgggcccgg
ctgcgcggcgacttcatccgcagggcgcaggagcagcgccgcgacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcggaccgtgctgtgcaaggaccccttccgg
tcggtggacgaccgggtggagaagctcatcgccggtatgtga
DBGET
integrated database retrieval system
