Serpula lacrymans: SERLADRAFT_448135
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Entry
SERLADRAFT_448135 CDS
T03135
Name
(RefSeq) superkiller protein 3
KO
K12600
superkiller protein 3
Organism
sla
Serpula lacrymans
Pathway
sla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERLADRAFT_448135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_448135
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SERLADRAFT_448135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_1
TPR_2
TPR_17
TPR_14
TPR_8
TPR_12
TPR_11
TPR_22
ANAPC3
ARM_TT21_C
TPR_9
ARM_TT21_N
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
18816445
NCBI-ProteinID:
XP_007317242
JGI:
448135
UniProt:
F8NTZ3
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MSSFAKAKLKAAREALGKKQYEIAREAASQVLDYEPDNYNAHVFLGLASLELNQYEKSEQ
FYRKAIELNSDQILAWQGISRLYERHEQWSKLTDTLLNLMDRFARSNDATKCAETLQKYI
ELCRDQGTREQIISSLSLLLPESPYYPVLSALPPPDPTSPTASSTHVTQIALLDSLPTLQ
EIITLTEKQEETTIKSEFDKRRTRLGAPPPDQLKKEVEREVWGVSKLLTLYNEVLNHPNT
PDELRRDVESRLIRHKQQYFYALSLSGASAAKKAEVGAELDGLVGGIVAISVPDELAWSL
FLEGKDSSTLGKFIAFSFTIYIRLLIFLAEGYGYEYLKTYIQLFAGKPLARLLEGYFAYN
LINLSNEEDDEVEDTGDDSEEDPYDTILDAFTLLPDSIVANRIVADTYLQELDYTSAIRV
AESGLELVQRHESNTGRKLVQVRKAFNVILGTSLVHLFPPKHHSRALSILDDVLAQDPND
LDCLMGRGYILEFAERWDEAGELFAKADELSPDDLAKGLRAKEEHAWCLRKNDLDHSTVS
LKGVLDTLESLEGHHHREEAYTYFITSLKRDSVYAPSYTSLGIYYSEFVSPPDPTRASKC
FQKAFELDPREADAARRLAEGFADEREWDLVEVVARRTIEGEGGLDAGMKSDDAVIAGRY
LPTNAWAWKAVGSVELARRNYSAAIQAFQVALRAIPDDQLSWVRLGEAYSKAGRHAAALR
ALIHARELREDDWICTYLIGEVQRQTAQFQDALLSFQSILDERPSEIVVLMAVAQTHLDL
GREERTTGFLSRAEESFVACIWVALRAVEESSGYRSVAWKTAADAIFSLSKHTSFTDVES
VRDVLNEVLLSVKPHTSSRLTGILVPASIELDVPLNGLRALEVAIAAYDYRLSLGSTEGA
AAGSSWFDLGIALNCWSVHCPSEAQEKVTVQANTCLMQALQEEPANPTYWNTLGALNFIA
KPKTAQHAYIKSLEIDSKSVITWTNLGLLYLYRNDLELANEALYRAQTLDPDYTTAWVGQ
ALVATANGHETDARALLEHTVTLTTDLVIPSYDTFSPVFFVLDRYTKRRTDDVSAQHLFG
LVCERLGQLELGADLLGRAITLLEAAYEESEDQVVERQFVIAHSNLARIRLGLHDASGAL
ESFESALGLLPEDDAGQGETMILRVHAQFGCGLARFAMGELQEALEAFQGALDTAGEDAL
LRGHVSVLLAQTMWAIGTDEFKESAKALLLECISADPENLMAINTLAGMGILTADDGLVD
AALSEILALPLEQRQTLDPRRDVGYLLIRHHLGQGETVQALQQAQKSLFIEPARNQLRRD
LATLTIQTGMPTSAHALLSGAAADTSITDLRETLALTAVAEAMVITERENGTPEGKRQLE
KVSKIAQKNIMLTPWRRRNWEVLAYVRASMQ
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtttgccaaagcaaaactaaaggcggcaagggaagctttagggaagaaacaa
tatgaaatagcccgcgaagctgctagtcaggttcttgattatgaacctgacaattataat
gcacatgtattcttaggtctcgcatcactggagctaaaccagtatgaaaagagcgagcaa
ttctatcgcaaggcaattgaattgaactcggaccagattctagcctggcagggcatatct
agactgtacgaacgccatgagcagtggagtaaattaacagatacccttctgaatttgatg
gaccggtttgcgcgtagtaatgacgccacgaagtgcgctgagactttacagaaatacatc
gagctgtgtcgcgaccaaggtactcgagagcagatcattagttcactatcactcctactc
cctgagtcgccgtattatcctgttttgtcggctttgcctccacctgatcccaccagtccc
accgcatcttcgacgcatgtcactcaaatcgcactccttgattcgttgcctaccttacaa
gaaattatcacactgacagagaaacaggaagaaacaacaatcaagagtgaatttgacaag
cggcgcacacgattaggcgcccctcctccagaccagctgaagaaagaagtcgagagagaa
gtttggggggtttctaaactgttgaccctgtataacgaagtcctcaaccaccctaacaca
ccggatgagctacggcgcgatgtcgaatctaggcttatccgtcataagcaacagtacttt
tatgcgctctctctttcaggagcatcagcagcaaagaaagcggaagtaggcgctgaattg
gatggtttggtaggcggtatcgtcgctatcagcgttcctgacgaattggcctggtcactg
ttcctagaagggaaagatagcagtaccttgggcaagtttatcgcgttttcttttacaatt
tacataaggttgctgatattcctggcagagggatacggttacgagtatctgaaaacatac
atacaattatttgcgggtaaacctctagcacgattactggaaggatattttgcctataac
ttaataaatctatccaatgaggaagatgatgaagtagaagatactggcgacgatagtgaa
gaagatccgtacgataccattcttgatgcgtttacacttcttccagattctatcgtcgca
aatcgaatagtagcggatacttatctgcaagaactcgattatacaagtgcaatccgagtg
gccgagagtggtctggagcttgtccagaggcatgaatcaaatacaggaaggaaattagta
caagttcggaaagcatttaatgtaatattaggtacatccctagtgcacctcttcccaccc
aagcatcactctcgtgctctctctattctggatgacgtccttgcgcaagatcctaacgat
ctcgattgtttaatggggaggggttatatattggagtttgctgagagatgggatgaagct
ggtgaactgtttgcaaaagcagacgaactaagtccagatgacttggcgaagggacttcgg
gctaaggaagagcatgcttggtgtttgaggaagaatgatttggatcatagcacagtttct
ctcaaaggggttctcgatacgctcgaaagcctagaagggcaccaccaccgcgaagaagcg
tacacatacttcatcacgtctctcaaacgcgatagtgtctatgctccatcatatacttcc
cttggcatttactattctgagtttgtatctcctcctgatcctactcgagcctcaaaatgt
tttcaaaaagccttcgagcttgatccacgtgaagcagacgctgctaggagacttgcagag
ggctttgctgacgagcgggagtgggatcttgttgaggtggtcgctcggcgaacaatcgaa
ggggagggtggtttggatgctggcatgaagtcagatgatgcagtaatcgcaggtagatac
cttcccaccaacgcatgggcgtggaaagcggttggctctgttgagttggcacgtaggaac
tactctgctgctattcaggcattccaggtggctctaagggccataccggacgaccagctt
tcgtgggttcgcctaggtgaagcatatagcaaggccggtcggcatgctgcagctcttaga
gctcttatccatgcacgggaactgcgagaagatgattggatatgcacttatctcattggt
gaagtccagcgccagactgcacagttccaagatgctcttctatcattccagtcaattctt
gatgaacggccttctgaaatagtagtcttgatggccgttgcacaaactcatcttgatctt
ggccgcgaagaacgcactaccggttttttatcaagggctgaggaatccttcgtggcttgc
atttgggtggccttacgagctgtagaagaaagttcaggataccgaagcgtagcttggaag
actgctgcggatgctatcttttccctgtccaaacatacatcttttacggatgtggaaagc
gtccgtgatgttttgaatgaagttcttctctcagttaagcctcatacaagttctcgtctt
actggtatcctggtccccgcctccatcgaacttgacgtcccccttaatggactacgcgcc
ctagaagttgcgatcgctgcttatgattatcgcctaagccttggttcgactgaaggggct
gcagcaggcagctcgtggtttgatctaggtatcgctttgaattgctggtcggttcattgt
ccttctgaagcacaagaaaaagtgaccgtgcaagcaaacacgtgtctaatgcaagcttta
caagaagagccagcaaatcctacttactggaatactctgggagctctgaatttcattgca
aaaccgaagacggcacaacacgcttatatcaagtctcttgaaatcgattccaagagtgtt
attacttggacgaatcttggcttactctatttatatcgcaatgacctagagctggccaac
gaagctttatacagagctcaaaccttagaccctgactacacaactgcttgggtgggccag
gcgcttgtagccacggctaatggacatgaaacggatgcgcgagccttacttgaacataca
gttactcttactaccgaccttgtaatcccttcttatgacaccttctctcctgtgttcttt
gttctcgatcgatataccaaacgtcgcacggatgacgtctctgcacagcacctttttggt
cttgtgtgtgaacgcctcggtcagcttgaactgggagcagacctgctaggacgcgcaata
acccttctcgaggcggcttacgaagaatcagaagatcaagttgttgaacggcagttcgtc
atagcacattcaaaccttgcgcgaataaggcttgggctgcatgatgccagcggggcacta
gaatcattcgagagtgcgttgggcttgttgcctgaggacgacgccggccaaggtgaaacg
atgattctccgtgtacacgcgcagtttggctgtggactagcacgttttgcaatgggcgag
ctgcaagaagcactagaagcattccagggagccctagatacagcaggggaagatgctctg
ctgcgtgggcatgtgagcgtattgctggcacagacgatgtgggcgatcggaacggatgaa
ttcaaagagtcagcgaaagcattattactggaatgtatctctgcagacccagaaaatttg
atggctatcaacactcttgcgggtatgggcatcctcacggccgacgacgggcttgttgat
gctgccctttctgagattcttgctctccccctcgagcagcggcaaacccttgacccgcga
agggacgtaggatatcttcttatcaggcaccatttgggtcagggtgagactgtgcaagcg
cttcaacaggcacaaaaatctttattcatagaacctgcacggaaccaacttagacgtgac
cttgctactctgactattcagacgggtatgccaacctctgcgcatgcattactatctggt
gctgcggcagacacgtcgataacagaccttcgtgagacgctggccttaaccgcagttgct
gaagcgatggttataaccgaaagagagaacggaacaccagaaggcaaaaggcaactggag
aaagtgtcgaaaatagcacaaaaaaacatcatgttgactccttggaggaggagaaactgg
gaagtattggcatatgtgcgagccagcatgcaataa
DBGET
integrated database retrieval system
